Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02641 ATGGAGGAGAAGGTGAAGGCTGAGGCACTGCAGATAATTGGAGCGTTTGATGTTCTGCCAAAGCTCGTCGTTTTTGATCTCGATTACACCCTCTGGCCTTTCTACTGCGAGTGTCGATCGAAGCGTGAAATGCCTTCTCTGTATCCCCACGCCAAAGGCATATTGTTAGCGCTCAAAGAGAAAGGGATCGACGTTGCAATCGCTTCTCGCTCACCCACAGCTGACATAGCAACCGCTTTTCTCAACAAATTGAGCCTCAGTTCGATGTTCGTTGCACAGGAAATTTATTCCAGTTGGACGCATAAAACGGATCATTTTCAGAGAATTCATTCCAGGACCGGTGTTCCCTTCAACTCTATGCTCTTTTTCGATGATGAGAATAGGAACATCCAAGCGGTATTATAA 405 0.4617 MEEKVKAEALQIIGAFDVLPKLVVFDLDYTLWPFYCECRSKREMPSLYPHAKGILLALKEKGIDVAIASRSPTADIATAFLNKLSLSSMFVAQEIYSSWTHKTDHFQRIHSRTGVPFNSMLFFDDENRNIQAVL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02641 134 SFLD C1.5.2: MDP Like 2 133 - -
Cca08g02641 134 SFLD Haloacid Dehalogenase 2 133 - -
Cca08g02641 134 SUPERFAMILY HAD-like 20 133 IPR036412 -
Cca08g02641 134 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 2 133 IPR010036 GO:0016791
Cca08g02641 134 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1-LIKE 2 133 - -
Cca08g02641 134 TIGRFAM HAD-SF-IIIC: HAD phosphatase, family IIIC 21 133 IPR010033 -
Cca08g02641 134 CDD HAD_MDP-1_like 20 133 IPR035679 -
Cca08g02641 134 Pfam Acid Phosphatase 19 39 IPR010036 GO:0016791
Cca08g02641 134 Pfam Acid Phosphatase 46 132 IPR010036 GO:0016791
Cca08g02641 134 Gene3D - 4 134 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02641 Cca-Chr8 60828124 60829422 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02641 K17619 - gmx:100305763 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01431 09 37559474 37561797 Cca08g02641 08 60828124 60829422 PCT