Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01198 ATGAATGTTCTGGCCCTAGGAGGTCGCGTCCTCACTTTCCCCTTATATAAGACATACCCTCTCACTCCCTCCACGATCCAATTCACACCCATTTTCCCCCACACCCAAAAGTTCCCATCTTCGCAAGCGATTCACCCTTTCTCCTTCTCCTCTCCCATGGCCACCTGCGTCGATTCTTCCCCCACCGCCGCCCCTCTTTCCCGCAAGCCAAACGCGCCCCAACCCGACGCCTACCTCAAATTCTGCCGGCCCACCTTCTCCATTTGCAACCCCTCCCTCGCACGTGCCGACGACCTCGACGCACGTGCCGACCACGACCTCTGGTGCAAGATTCAGGACGAGGCCAAGCTGGACGTGGACCAAGAACCGATCTTGTCGGGCTACTATTTCAGCTCGATCCTCTCTCACAAGTCGTTGGAGAGTGCCTTGGCCAACCACTTGTCCATAAATTTGAGCACTTTGAGCCTCCCGAGCACCACCCTTTACGATCTTTTCATGGGTGTGTTGATCGACGATGTTGGGGGGGACATCATGGGTGCTGTTAAGGATGATTTGGTGGCTGTCAAGGAGAGGGACCCTGCTTGCATAAGCTATGTCCACTGCTTGTTGAATTTCAAGGGGTTTCTGGCTTGCCAGGCTCATAGGGTTGCTCACAAGCTCTGGCTTCAGGGTAGGAAGGTTTTGGCGCTGTTGATTCAGAATAGGGTGTCTGAGGTTTTTGCTGTGGATATCCACCCTGGTGCAAAGATTGGAAGAGGGATTTTGTTGGATCATGCAACTGGGCTTGTGGTGGGGGAGACTGCAGTGATTGGGACTTGTATTTTGGGGAACATTAAGATTGGTGATGGGGCTAAGATTGGTGCTGGCTCTGTGGTGTTGAAGGATGTGCCACCAAGGACTACTGCAGTTGGGAACCCTGCTAGGTTGGTTGGAGGGAAGGAAAACCCCATTAGGTTGGACAAGATGCCTAGTTTCACCATGGACCATACTTCACATATTTCTGAGTGGTCTGATTATGTTGAGGAGGAGGCTTGCTTGGTTGGTTGTTGTGCAAGAGAGAATCTAAGTTCTCCTGCTGACAACAGGGGTGCCCCTTTGAATCATGGTGTTAGGTTTAAAGAATAG 1125 0.5209 MNVLALGGRVLTFPLYKTYPLTPSTIQFTPIFPHTQKFPSSQAIHPFSFSSPMATCVDSSPTAAPLSRKPNAPQPDAYLKFCRPTFSICNPSLARADDLDARADHDLWCKIQDEAKLDVDQEPILSGYYFSSILSHKSLESALANHLSINLSTLSLPSTTLYDLFMGVLIDDVGGDIMGAVKDDLVAVKERDPACISYVHCLLNFKGFLACQAHRVAHKLWLQGRKVLALLIQNRVSEVFAVDIHPGAKIGRGILLDHATGLVVGETAVIGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLVGGKENPIRLDKMPSFTMDHTSHISEWSDYVEEEACLVGCCARENLSSPADNRGAPLNHGVRFKE 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01198 374 SUPERFAMILY Trimeric LpxA-like enzymes 107 311 IPR011004 -
Cca09g01198 374 PANTHER SERINE ACETYLTRANSFERASE 271 340 - -
Cca09g01198 374 PANTHER SERINE ACETYLTRANSFERASE 271 340 - -
Cca09g01198 374 CDD LbH_SAT 240 306 IPR045304 -
Cca09g01198 374 PANTHER SERINE ACETYLTRANSFERASE 53 271 - -
Cca09g01198 374 PANTHER SERINE ACETYLTRANSFERASE 53 271 - -
Cca09g01198 374 Pfam Serine acetyltransferase, N-terminal 107 213 IPR010493 GO:0005737|GO:0006535|GO:0009001
Cca09g01198 374 Gene3D serine acetyltransferase, domain 1 92 239 IPR042122 -
Cca09g01198 374 SMART SATase_N_2_a 107 213 IPR010493 GO:0005737|GO:0006535|GO:0009001
Cca09g01198 374 Gene3D Hexapeptide repeat proteins 240 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01198 Cca-Chr9 33785065 33786375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01198 99 329 Miscellaneous Gene Families AT2G17640 45.283 1.93e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01198 K00640 - gmx:606507 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01198 09 33785065 33786375 Cca09g01198 09 33785065 33786375 ECH
Cca09g01198 09 33785065 33786375 Cca05g02011 05 39988290 39989855 PCT