Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01170 ATGAGGCAAAAGAAGAACAACGCAGATTCTAGTGGTTTCTTGGGAAGCATTTCTTCCAATTTTATCAGATCATTCTCTTCTTCTAATCGCAAACCCATTTCTTGTTCTTCGAACCCTAAATACCCAAAATCTGACGCTGAAAACACTCCCCCTACCCATCCAAACATTCCTCTCAATCTTCACCACCAATCAAAGCCCGACGACCCATTTCCCCAAAGCAACTCACATGTGAAGGCAAGTTCAAAAATTAGACCTGAAAATAGCAATGGAAAAGAGGGAAATTGGAAAATTAAGAAGGTTTCTTCTGATGCCTTGTGCGTTGGGGACAGAAAGTTCACGTTTGATGAAGTTTTTGATTCCAACTCCAGTCAGGAAGAAGTTTTCCAGTCAGTGGGTGTTCCCTTAGTTCGAAATACTTTAGCTGGTTACAACACTACAATTCTGTCATATGGCCAGTCTGGAAGTGGAAAGTCTTACACAATGTGGGGTCCTCCAAGTGCCATGGTTGAGGAGTCTAATTCTAGTCACCACGGAATTGTTCCTCGGATCTTCAGAATGTTATTTTCTGAGCTTGAGAGAAGAAGACTTACATCTGATCAGAAACAGTTCAGCTATCAATGTCGTTTGTCATTTCTTGAGATAAACAATGAAAGAATTGGGAATTTACTCAATCCTATACAACAGAACCTTGAGATGAAGGATGATTTCAGAAATGCACCATATGTTGAGAATCTGATCGAGGAATACATAACTAACTATGATGATGTAGCACAAATTCTGATTAAGGGCCTTTCAAGGAGAAAAATTGGAGCAACGAGCTTAAATTCTAATAGCTCCAGATCACATATAATTTTCACAGTTGTCATTGAGTCGTTGTGTAAGGGAACCACAAAGGGTTTGAGTAGCTCAAAAACTAGCAGAATCAGCCTTATTGATCTTGCTGGACCAGACAGGGATGAAGTTGATGATGGAGGTAGCGGCAGACATGCAGAGAAATCATTATCCCAGCTTGAGAATTTAGTGGATGCTCTGTGTAACAAATTTCAGTCTGGAAAAGATGAAGACATTCCACACAGTGACTCCTGTTTAACACGCTTACTCCAAGAATCACTTGGTGGAAATGCCAAACTCTCAGTAATATGTTCCATCTCCCCTGATAACAAGAGTAATGATGAAACACTGCACACACTCAGATTTGGGGAGCAAGTAAGATCCATTAGAAATGAGCCAGTTATCAATGTAGTGAAGGAGCCTGATATTGATTTGGGTAATACTATCCGACACTTGAAGGAAGAACTTATTAGAGCAAAGGCTGATGTTCATAGCTCAGCTGGGAGTAAAGATGGATACTTCCAAGGACATAATGTGCAGGAAAGCCTGAATCAGATGAGAGTCAGCTTAAACCACTCTCTTTTCCTATCCAACATAGATAGTGATACTGATGAGCATATAAATGTCAATGAAGATGACATAAGGCAATTACGCAAGCAAATTGATGAATTAGATAGTTCACGTGATGGGAATCCAAAGGGCATATCTGTTGATGAAGATTGTGTCCAGTCTTATTCTGTTGAGGAAAATTGCGATGCAGACGCCACCAGTGCTGATGAAATTGAAAAGGCTGAGGTATGCCGTGGGAAAACATTGAGAGATAGCATTTCAGTCAATTCATGTAGTCAATCTCCAATACTTGCCGGACCACAGTTGTCTGAATCTCCAAAATTCAGCAAAAGTCAAAGGAAAAGTGTGACTATTTCATCGAGTTATCTTGGCAGTTGGAACAATGTGGGAGAGAGTTCAACTTTCAGTAACAATGTCTTGAGCAAACCATTTAAACAGGGTGAGCATGTGCAATCCTCATTACAGTCTAGCAAGGCTGAGTCCTTGGCAGCAAGCCTTCAGAAGGGATTACAGATTATTGACTATCACCAACAGAACTCAGCATTGAACAAATCTTCATCTTCCTTCTCCTTTGAGCACTTAACTTTGACACCATGTCTGGAAATTGACAAGGCTGAATCTTATGATCAAACAATACAACAGAAGCCTTCCAGTGATGAAGTAACTGCTGCTCTCATATGTGCATCTTGCCGGACAAAAATATCTAGTCAGGATTCCAGTGATGCAGTGACAGATAAAATTCCAAAACATTTGGAGAATGTAATGACAAAAAGCATCATGAAAGAGAGGGAGCTCGAGAATGTTTGTAAGGAGCAAGCAGCTAGAATTGAGCAACTAAATCAGCTGGTGGAGAAATTGAAAGGAGAGAAAGAACTGAACTCCATTACTGTGTATGGTCAGTGTGAAGATTATAACTCAATGAAAGATGAAGCAAAGCTTCTGCGGGGAATTTCCTTAAATGGTCATTTACCTTGTATTATAGAGGAAAAATGTGATATTAAAGAAGTCCAGGAAGAGTTAGCCCAAAGAGATGTCTCCTTTGATTCAACTGAGAAGGAATTACTTCTTAAGGAAATTCAGAATCTAAGAAGCAAGCTGCAATTATGTAATGATGCACCAGTTAAAAAGTCTACGGACAAACTAAGGTCTTCTTTGGTGTCAAGATCCACACAACTGCAAAAAAGTGGTGTATTCTCTTATGACAATTGCAATGAAGAGCTAGAGAATGAAAGACAGAAATGGACAGAAATGGAAAGTGAGTGGATTTGTCTGACTGATGAGCTTAGAGCTGATCTTGAGTCCTACCGCCAGCGTACAGAGAGGTTGGAGATGGAACTGAAGTCTGAGAAGAAGTGCACAGCTGAGACGGATGATGCTCTAAAGAGGGCAGTTATGGGACATGCTAGAATGGTAGAACACTATGCTGATCTACAAGAAAAATATGATGACTTGGTTGCTAAGCATGATGCTATGATGGAAGGGATAGCAGAGGTGAAGAAGGCAGCAGCAAAAGCCTCGAAGAAAGGTCATGCGCGCTTTGCCAAATCACTTTCTGCCGAGCTTTCAGCATTGAGGGTGGAAAGAGAAAGGGAATCCAAATTATTGAAAAAGGAGAACCAGAGCTTGAAGATTCAACTTCGCGATACTGCTGAAGCTGTTCAGGCTGCTGGAGAACTACTTGTTAGACTAAGAGAAGCTGAACATGTAGCAGCTGTTGCAGAGGAGAACCTTGCAAATGTGCAACAAGATAATGAAGATTTAAAGATGCAAATTGAGAAGCTGAAAAGAAAACACAAGACAGAGATTAATACCATGAAGCAGTACATTACAGAGAGCAAATTACCACAGTCTGCACTGCAACCACTGTATAGAGAGGATTCTGATGTGGCACACAATGCAACTTCCTCCTATACGTATGATGATCAGGCATGGAGAGCAGAATTTGGAGCAATATATCAAGAGCATTACTAA 3372 0.4054 MRQKKNNADSSGFLGSISSNFIRSFSSSNRKPISCSSNPKYPKSDAENTPPTHPNIPLNLHHQSKPDDPFPQSNSHVKASSKIRPENSNGKEGNWKIKKVSSDALCVGDRKFTFDEVFDSNSSQEEVFQSVGVPLVRNTLAGYNTTILSYGQSGSGKSYTMWGPPSAMVEESNSSHHGIVPRIFRMLFSELERRRLTSDQKQFSYQCRLSFLEINNERIGNLLNPIQQNLEMKDDFRNAPYVENLIEEYITNYDDVAQILIKGLSRRKIGATSLNSNSSRSHIIFTVVIESLCKGTTKGLSSSKTSRISLIDLAGPDRDEVDDGGSGRHAEKSLSQLENLVDALCNKFQSGKDEDIPHSDSCLTRLLQESLGGNAKLSVICSISPDNKSNDETLHTLRFGEQVRSIRNEPVINVVKEPDIDLGNTIRHLKEELIRAKADVHSSAGSKDGYFQGHNVQESLNQMRVSLNHSLFLSNIDSDTDEHINVNEDDIRQLRKQIDELDSSRDGNPKGISVDEDCVQSYSVEENCDADATSADEIEKAEVCRGKTLRDSISVNSCSQSPILAGPQLSESPKFSKSQRKSVTISSSYLGSWNNVGESSTFSNNVLSKPFKQGEHVQSSLQSSKAESLAASLQKGLQIIDYHQQNSALNKSSSSFSFEHLTLTPCLEIDKAESYDQTIQQKPSSDEVTAALICASCRTKISSQDSSDAVTDKIPKHLENVMTKSIMKERELENVCKEQAARIEQLNQLVEKLKGEKELNSITVYGQCEDYNSMKDEAKLLRGISLNGHLPCIIEEKCDIKEVQEELAQRDVSFDSTEKELLLKEIQNLRSKLQLCNDAPVKKSTDKLRSSLVSRSTQLQKSGVFSYDNCNEELENERQKWTEMESEWICLTDELRADLESYRQRTERLEMELKSEKKCTAETDDALKRAVMGHARMVEHYADLQEKYDDLVAKHDAMMEGIAEVKKAAAKASKKGHARFAKSLSAELSALRVERERESKLLKKENQSLKIQLRDTAEAVQAAGELLVRLREAEHVAAVAEENLANVQQDNEDLKMQIEKLKRKHKTEINTMKQYITESKLPQSALQPLYREDSDVAHNATSSYTYDDQAWRAEFGAIYQEHY 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01170 1123 Gene3D Kinesin motor domain 70 416 IPR036961 -
Cca09g01170 1123 PRINTS Kinesin heavy chain signature 142 163 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g01170 1123 PRINTS Kinesin heavy chain signature 272 289 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g01170 1123 PRINTS Kinesin heavy chain signature 307 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g01170 1123 PRINTS Kinesin heavy chain signature 356 377 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g01170 1123 SMART kinesin_4 74 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g01170 1123 Coils Coil 484 504 - -
Cca09g01170 1123 MobiDBLite consensus disorder prediction 66 88 - -
Cca09g01170 1123 Pfam Kinesin motor domain 101 406 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g01170 1123 Coils Coil 867 887 - -
Cca09g01170 1123 PANTHER KINESIN-RELATED 46 1105 IPR027640 GO:0003777|GO:0007018
Cca09g01170 1123 Coils Coil 819 839 - -
Cca09g01170 1123 Coils Coil 1030 1078 - -
Cca09g01170 1123 MobiDBLite consensus disorder prediction 26 59 - -
Cca09g01170 1123 PANTHER KINESIN MOTOR DOMAIN PROTEIN 46 1105 - -
Cca09g01170 1123 Coils Coil 729 756 - -
Cca09g01170 1123 Coils Coil 892 919 - -
Cca09g01170 1123 ProSiteProfiles Kinesin motor domain profile. 76 406 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g01170 1123 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 418 IPR027417 -
Cca09g01170 1123 MobiDBLite consensus disorder prediction 26 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01170 Cca-Chr9 33172192 33177966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01170 66 448 Miscellaneous Gene Families AT5G06670 30.000 3.64e-44 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01170 K10400 - gmx:100817066 1790.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01170 09 33172192 33177966 Cca09g01170 09 33172192 33177966 ECH
Cca09g01170 09 33172192 33177966 Cca05g01993 05 39824573 39830808 PCT