Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01118 ATGGTTTTTCCTTCTCTCTCTTACCCTCATTTATCTCACTCACCCCACTTTCATGTCCTCTATATATATGCATATTCAGAAACCCCACACTTATTCTATTCCCACTACTTCCAATTCCAACTACCTCTTGttcattctcatcattcatcattcttctttctctcattTGCCAAAGCCATGAACAAGTTTAAGAAATCTCAAGTTCTAGTGCTCTTTGTTCTAGTAGTTCTTCTTCTCATCACACCCTCTTTACCTTCCTCTCTGAGGCTAACCTACTTGTATTTCATCACAAACTTCCTCATCATGGCACTTTGTGCTGAAGCTGGTCTCCTTTCAGTTTTTGCAAGCCCTTCAGAAGATAGAAGGCAATCTTCTTCTGTTACATCTGAAGCCACTTCTGAGAAAAGAGAAGCTTCCAATTCCACCCCTTCGGTTGCTAGTGCTGTCTCAGAACATGTTGAAAAGTCTGCATCTGAGAGGGGTGTTTGTGTCACCAAAGTGGACAAGGTGCAAAATTGTCCTTCAGTGCCTACTAGCCTTTTCTTCATAGGGGGTGGAGAAGCTGGTGAAGAAGTCATGGATGAAGAGCTTGAAGCAGAAGATGAAATTGGAGGAGTTAATGGCCAAGAACTCTTTGCAAAAGCTGAGGCATTCATTGGGAACTTCTACAAGCAACTCAAGATGCAAAGTGAGGAATCTTGGATTTATCAGAAAGCCTTTTAG 723 0.4011 MVFPSLSYPHLSHSPHFHVLYIYAYSETPHLFYSHYFQFQLPLVHSHHSSFFFLSFAKAMNKFKKSQVLVLFVLVVLLLITPSLPSSLRLTYLYFITNFLIMALCAEAGLLSVFASPSEDRRQSSSVTSEATSEKREASNSTPSVASAVSEHVEKSASERGVCVTKVDKVQNCPSVPTSLFFIGGGEAGEEVMDEELEAEDEIGGVNGQELFAKAEAFIGNFYKQLKMQSEESWIYQKAF 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01118 240 PANTHER OS01G0532300 PROTEIN 60 234 - -
Cca09g01118 240 MobiDBLite consensus disorder prediction 124 150 - -
Cca09g01118 240 Pfam Cotton fibre expressed protein 209 234 IPR008480 -
Cca09g01118 240 PANTHER OS01G0532300 PROTEIN 60 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01118 Cca-Chr9 32247859 32248863 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01118 - - ccaj:109811312 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01118 09 32247859 32248863 Cca09g01118 09 32247859 32248863 ECH
Cca09g01118 09 32247859 32248863 Cca05g01953 05 39350883 39351401 PCT