Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01103 ATGGGAAATTCCCTTATTCTCTTTATCTCTTTCTTCATCTTCAGCTTAGGACTCTTGGAGGCTCAAAAGGCTCCAGCTGTTTATGTGTTTGGAGACTCACTTGTTGATGTTGGCAACAACAATTACTTGACCCTTTCAATTGAAAAGGCAATTCTTCCTCACTATGGCATTGATTTTCCAACTAAGAAACCAAATGGCAGATTTACCAATGGCAAGAATGCTGCAGATTTAATTGCTGAAAAATTGGGCCTACCCACATCACCACCTTATCTTTCCTTAGTATCTAAGGTCCACAACCACAACAACAAGAAGAATGTATCTTTCTTGGCTGGTGTTAACTTTGCCTCAGGAGGTGCTGGAATATTTAATGGATCAGATGATGGTTTTAGGCAATCAATACCTTTGACAAAGCAAGTGGACTACTACTCTCAAGTGCATGAACAACTGAAACAACAAATAGGAGCATCTACTCTTGAGAAACATCTCTCAAAGTCCATCTTCATTGTGGTGATTGGTAGCAATGATATTTTTGGTTACTTTGACTCAAAGGATCTTCAAAAGAAAAACACCCCTCAGCAGTATGTGGATTCCATGGCTTCCACATTAAAGGTGCAACTACAGAGATTATACAACAATGGGGCAAAGAAATTTGAGATTGCTGGTGTTGGTGCAATTGGGTGCTGCCCAGCATACAGGCTCAAGAACAAAACGGAATGCGTTTCAGAAACCAATTACTTGTCTCTTAAATATAATGAAGCTCTTCAATCCATGTTAAAGAAATGGAAATTGGAGAATAAGGACATAAGTTATTCCTATTTTGATACTTATGCTGCTATTCAAGACCTTGTTCACAATCCATCTTCATACGGATTTGTTAATGTGAAAGGTGCATGTTGTGGACTTGGTGAGCTGAATGCTGAATTTCCATGCCTTCCAATTTCGAAGCTTTGTTCAAACAGACAAGATCATATTTTCTGGGATCCATTCCATCCAACAGAGGCAGCTTCTCGCATATTTGTGGATGAAATTTTCAATGGACCTCCAAAATACATATCTCCTATTAATATGGAACAGCTACTTGCTATCTGA 1089 0.3875 MGNSLILFISFFIFSLGLLEAQKAPAVYVFGDSLVDVGNNNYLTLSIEKAILPHYGIDFPTKKPNGRFTNGKNAADLIAEKLGLPTSPPYLSLVSKVHNHNNKKNVSFLAGVNFASGGAGIFNGSDDGFRQSIPLTKQVDYYSQVHEQLKQQIGASTLEKHLSKSIFIVVIGSNDIFGYFDSKDLQKKNTPQQYVDSMASTLKVQLQRLYNNGAKKFEIAGVGAIGCCPAYRLKNKTECVSETNYLSLKYNEALQSMLKKWKLENKDISYSYFDTYAAIQDLVHNPSSYGFVNVKGACCGLGELNAEFPCLPISKLCSNRQDHIFWDPFHPTEAASRIFVDEIFNGPPKYISPINMEQLLAI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01103 362 Gene3D SGNH hydrolase 17 347 IPR036514 -
Cca09g01103 362 SUPERFAMILY SGNH hydrolase 24 344 - -
Cca09g01103 362 CDD SGNH_plant_lipase_like 25 347 IPR035669 -
Cca09g01103 362 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 360 - -
Cca09g01103 362 Pfam GDSL-like Lipase/Acylhydrolase 27 342 IPR001087 GO:0016788
Cca09g01103 362 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01103 Cca-Chr9 32072454 32078819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01103 24 360 Acyl Lipid Metabolism Gene Families AT4G10950 33.913 4.68e-66 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01103 - - gmx:100790145 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01103 09 32072454 32078819 Cca09g01103 09 32072454 32078819 ECH
Cca09g01103 09 32072454 32078819 Cca05g01943 05 39240342 39243691 PCT