Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01099 ATGGATAGTCTAAACAGGCAGAGGAGTGGAATATGGAGATGCTTGAGAGATGGAGACTTTGAAGAAGAAGAAGTTTGGGCTGTTCTCAAGGACAGACCTGATTATCACAAGCCAAAAGAAAAAGGGTCTTCTCCTCTTGCTGTCCCCAGGACTCTCCCAAGTGCAACAAGGATGATCCCAAGGACTAGTAGTGGCAATAGTAGTGCTAGTTCCTCTCATGAGACCAAGGTTCTTCAGCAATCAGTACCTCTCAACATTCCTGATCGGTCAGAGATTTATAGGAACAAGCAAAGCAAGACCAATAAGAGTGTTTCAAGGTTTGGTGACTATGATGATTTCTATCATTCtgttgatggtgaaggtgatggtggagggtataatagtgatggtgaAGAAGAGGAAGAGGATGATGAGTATGATACCAAGCTGCCCCCACATGAGTTCATTGCAAGGAGGCTTGCAAGGAGTCAAATATCCTCATTTTCAGTTTTTGAAGGTGTTGGGAGGACCCTCAAAGGGAGGGATCTTAGCAAAGTGAGGAATGCTGTTCTTACAAAAACTGGTTTCCTTGAGTCATTGTGA 582 0.4038 MDSLNRQRSGIWRCLRDGDFEEEEVWAVLKDRPDYHKPKEKGSSPLAVPRTLPSATRMIPRTSSGNSSASSSHETKVLQQSVPLNIPDRSEIYRNKQSKTNKSVSRFGDYDDFYHSVDGEGDGGGYNSDGEEEEEDDEYDTKLPPHEFIARRLARSQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01099 193 PANTHER CYTOSKELETON-REGULATORY COMPLEX PROTEIN END3, PUTATIVE ISOFORM 9-RELATED 3 191 - -
Cca09g01099 193 Pfam Senescence regulator 31 191 IPR007608 -
Cca09g01099 193 MobiDBLite consensus disorder prediction 125 140 - -
Cca09g01099 193 PANTHER EXPRESSED PROTEIN 3 191 - -
Cca09g01099 193 MobiDBLite consensus disorder prediction 31 144 - -
Cca09g01099 193 MobiDBLite consensus disorder prediction 56 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01099 Cca-Chr9 32000731 32001312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01099 - - gmx:100788195 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01937 05 39168949 39171054 Cca09g01099 09 32000731 32001312 ECH
Cca09g01099 09 32000731 32001312 Cca09g01099 09 32000731 32001312 ECH
Cca09g01099 09 32000731 32001312 Cca05g01937 05 39168949 39171054 PCT