Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01085 ATGAAGATCTCCGCCGACTCCACGCGTCCGCCGCGCCCATTGCCGCCTCCCAAAACCCTACCTCCCTCGCCGGACTCTGATCTCCAGCTGCACCGCCGCCGCCGCCACCCCCGAACTCCGGCCAGCCGATGGAGGCGGACTGCCGGAAAGCGCAGCAGGCCTGAGACTCCCCTGTCCAAGTGGAAGATCCACGACGGCAGAGAGAGGACCGCCGCCGGAGGCCACGGCGATCCGCTCGAGGAGCTCGCCCGGGAGAATGAGGCGACGCTGCCGCCTCAAGCCGTGTCGGCGAGGAAGCTCGCCGCCGCGCTGTGGCGGATGCAGCTTCCGGAAGCGGTGGAGTGTGACGGCGCAAGGCGGAGGGGTTCGAGAAAGATTGGTGGAGATCGTTTGGGATTGGGAGTTCAGCATGGAATTGGCCATGTAGACCACCAATTTCTCAGCCATCAAAGTGGCATGATGCATGGTTCTGCTACGAAGAATTCATCACAAAGTCCTCATTCTATTTCTGGGATTAAGAATGGACACTTTTGTGAGCTCAAGCCTTCTTTACAGTTTACCAGTACAGCAATGGAGGGGGCAACAAAGTGGGATCCTGTTTGTTTAAAAATATCAGATGACGAGCAGCATATCTACAGCCAAATGAAACTACTGGACCAAAAGGTTAGCACCGTTTCTGCTGTATCTGCTCTTGAAGCTGAACTAGAGCAGGCTCGTGTACTGATTCAGGAGCTTGAGACTGAACGCCACTCCTCCAAAAAGAAACTCGAACATTTTTTAAAGAAAGTTGGTGAAGAAAGGGCCTCATGGCGAAGCAAAGAGCATGAGAAAATCCGCGCTTATGTTGATGACATTAAATCAGAGTTGAGTCGAGAAAGGAAAAGTCGCCAGAGGATTGAAATTGTCAATTCCAGGTTGGTTAATGAGTTGGCAGATGCTAAGTTATTAGCAAAAAGGTACATGCAGGATTACGAGAAGGAAAGGAAGGCTAGAGAATTGATTGAGGAAATTTGTGATGAGCTTGCTAAGGAAATTGGAGAAGACAAGGCTGAAATTGAAGCTATGAAGAGGGAATCTATGAAACTTAGGGAAGAAGTGGAAGAAGAGAGAAAGATGTTACAGATGGCTGAAGTATGGCGTGAAGAACGTGTTCATATGAAATTGATTGATGCAAAAGTTGCTCTTGATGAGAAGTACTCACAGATGAATAAACTAGTAGCAGATTTGGAAACCTTTCTCAAATCAACAAATGTGAACCCAAATGCTAAGGAGATGAAAGAGGCACGGTCACTTCAACAGGTTGCAGCTGCTGTAGACATTAAGGACATCAAGGGATTTTCATATGAGCCACCTAATCCAGATGATATTTTTTCCATTTTTGAAGATGTAAATTTTGGGGAACCTGACGAGAGGGAGATTGAACCATGTGTTACTTACTCTCCAGTGAGTCATGCCTCAAAGATTCACACAGTGAGTCCTGAAGCCAACTTGATTAGTAAGGATAACTTTCAAAGATGTTCTGATGTATTTATGGATGACAATGGTGATATAGAAGATGAAAGTGGATGGGAAACTGTGAGCCATGTTGAGGATCAAGGATCAAGTTGTTCACCCGAAGGGAGTGCCCTATCAGTGGCAAGGAATCATCGAGAAAGTGATGTCTCAGGGAGGAGTGTGCTTGAATGGGAAGATAGTGCATGTGGAGAGACTCCAATAACAGAAATCAGTGAAGTCTGTTCAGTCCCAACTAAGCAATCCAAGAAGGTATCCTCCATAGCAAGGCTTTGGAGGTCTGGCCCAAACAGTGGGGATAATTACAAGATAATCTCTGTGGAGGGAATGAATGGTAGGCTTTCAAATGGAAGGGTATCTAATGGGGGCATAATGTCTCCTGACTGGGGACTTGGTAAAGGTGGACTAAGCCCCCAAGACCTTCTATGCCAGTTGAGTTCTCCAGAGTCAGCAAATCTGCATAATCGAGGAATGAAAGGATGCATTCCTCGCACCGTGCAGAAGAGTAGTTTGAAAGCCAGACTTTTGGAGGCTAGGATGGAAAGCCAGAAGGTTCAGTTGCGCCATGTTCTTAAACAGAAGATTTAG 2100 0.4748 MKISADSTRPPRPLPPPKTLPPSPDSDLQLHRRRRHPRTPASRWRRTAGKRSRPETPLSKWKIHDGRERTAAGGHGDPLEELARENEATLPPQAVSARKLAAALWRMQLPEAVECDGARRRGSRKIGGDRLGLGVQHGIGHVDHQFLSHQSGMMHGSATKNSSQSPHSISGIKNGHFCELKPSLQFTSTAMEGATKWDPVCLKISDDEQHIYSQMKLLDQKVSTVSAVSALEAELEQARVLIQELETERHSSKKKLEHFLKKVGEERASWRSKEHEKIRAYVDDIKSELSRERKSRQRIEIVNSRLVNELADAKLLAKRYMQDYEKERKARELIEEICDELAKEIGEDKAEIEAMKRESMKLREEVEEERKMLQMAEVWREERVHMKLIDAKVALDEKYSQMNKLVADLETFLKSTNVNPNAKEMKEARSLQQVAAAVDIKDIKGFSYEPPNPDDIFSIFEDVNFGEPDEREIEPCVTYSPVSHASKIHTVSPEANLISKDNFQRCSDVFMDDNGDIEDESGWETVSHVEDQGSSCSPEGSALSVARNHRESDVSGRSVLEWEDSACGETPITEISEVCSVPTKQSKKVSSIARLWRSGPNSGDNYKIISVEGMNGRLSNGRVSNGGIMSPDWGLGKGGLSPQDLLCQLSSPESANLHNRGMKGCIPRTVQKSSLKARLLEARMESQKVQLRHVLKQKI 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01085 699 PANTHER ACTIN CYTOSKELETON-REGULATORY COMPLEX PAN-LIKE PROTEIN 22 699 - -
Cca09g01085 699 MobiDBLite consensus disorder prediction 1 78 - -
Cca09g01085 699 Coils Coil 324 372 - -
Cca09g01085 699 MobiDBLite consensus disorder prediction 33 47 - -
Cca09g01085 699 Coils Coil 228 262 - -
Cca09g01085 699 MobiDBLite consensus disorder prediction 9 23 - -
Cca09g01085 699 PANTHER GB|AAF24581.1 22 699 IPR043424 -
Cca09g01085 699 MobiDBLite consensus disorder prediction 48 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01085 Cca-Chr9 31819368 31828592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01085 - - pvu:PHAVU_006G042900g 1140.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01925 05 39074454 39078796 Cca09g01085 09 31819368 31828592 ECH
Cca09g01085 09 31819368 31828592 Cca09g01085 09 31819368 31828592 ECH