Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01925 ATGAAGTTTTCCGGCAACGGGAGTTTTCCGGCGGACATTGCTTCCAAGGCCGCTGTGAACCCTTCGCCGGACTCAGATCTTCAACCGGTGAAGCCCTTTCAGCGGCGGAAACCGAGAACTCCGGGGACCCGGTTGAGGAGACACGGAGGCAAACGGAGCAGACCGGAGACTCCTCTGTTGAAATGGAAGATCCATGAAGATCCACTCGAAGAGGACCAGAAGTCCTCTGTCGCTGGGTCCCGCCGGAAAACGTGCCGGAGCGCTAAGAAGCAAACGGAGGCCGCCGTGTCGGCACGGAGACTCGCAGCCGGGCTGTGGCGGTTGCATCTGCCGGAGACGGCAACCGGTGATGGCCGGAAGGGGTTGGAACATAAGCATGGAAATGGTCACGTTGGCCTCCAGTTCCTGGGTCATCCAAATGGCATGACCCATGATTCTGATACGAAGAAGAATCTATCTCAAAGTCCCCGTTCCATATTTCGGACAAAGAATGGACACTTCTGTGAGCCTGAACCTTTCAAGTATCCCAACACTGAAATGGAGGGTGCAACAAAATGGGATCCTTTATGTTCAAAAACATCTGATGAGGCGCAGCATATCTACAGCCACCTGAAACTTCTTGACCAAAAGGCAAGTGCTGTATCTGTTGTATCTGCTCTCGGAGCTGAACTAGAGCAGGCTCGAGCACGAATTCAGGAGCTTGAGTCCGAACATCACTCCTCCAAAAAGAAGCTTGAGCATTTCCTGAAGAAAGTCGGTGAGGAGAGGGCTCAATGGAGAACTAGAGAGCATGAGAAAATCCGTGCTTACATTGATGACATTAAAGCAGAGTTGAATCGAGAAAGGAAAAATCGGCAGAGGATTGAAGTTGTCAATTCGAGGTTGGTAAATGAGTTGGCAGATGCCAAACTCTCTGCAAAGCGCTACATGCAGGATTATGAGAAGGAAAGGAAGGCCAGAGGATTGATTGAGGAAGTGTGTGATGAGCTTGCCAGGGAAATTGGAGAAGACAAGGCTGAAGTTGAGGCAATGAAGAGGGAATCTATGAAACTCAGGGAAGAAGTGGATGAAGAGAGGAAGATGTTACAACTGGCAGAAGTATGGCGTGAAGAACGTGTTCAGATGAAGTTGATAGATGCAAAAGTTGCTCTTGAAGAGAAGTATTCGCAGATGAATAAACTTGTTATAGATTTGGAAAGTTTTATAAGGTCAAAAAGTGCAGAACCAAACACAATGGAGATGAGAGAGGCGCAGTTACTTCAACAGGCTGCAGCTGCAATGAACATTCAAGACATCAAGGGATTTTCATATGAACCCCCAAATTCCAACGACATTTTTGCCATTTTTGAAGATGCAAATTTTGGTGAAGCAAATGAGAGGGAGATTGAACCATGTGTTTCTCACAGTCCAGCTAGTCATGCCTCGAATATTCACATGGTGAGTCCTGAAGCCAATGTAATGACCAAGAACGGCATTCAGAGGAGCTCTGATGTATTTATGGATGACAACGGGGATATAGAAGGAGATGAAAGTGGATGGGAAACTGTGAGCCATGTTGAGGATCAAGGCTCAAGTTATTCACCAGAAGGGAGTGCACAATCCTTGAACAGGAATCATAGAGAGAGTAATGTCTCAGGGAGAAGTGTACTTGAATGGGAAGAAACTGGAGGTGAGGAGACACCAATAACTGAAATTAGTGAAGTGTGCTCTATACCAACTAAGCAATCAAAGAAGGTATCATCCATAACTAGGCTTTGGAGGTCACACCCAAATAATGGTGATAATTACAAGATAATCTCTGTGGAGGGAATGGATGGTAGACTTTCAAATGGAAGGTTGTCTAATGGGGTGATCAACATGTCTCCTGATCATGGATCAGGTAAAGGGGGGCTGAGCCCCCAAGACCTTCTATACCAGTTGAGTCCTGAGTCAGGAACTCCGCATGCCGCACATCGAGGTAAGAAAGGATGCATTCCTCGAACCGTGCAGAAGAATAGTTTGAAAGCCAGACTCTTGGAGGCTAGAATGGAAAGCCAGAAGGTTCAGTTGCGCCATGTTCTTAAGCAGAAGATTtag 2076 0.4697 MKFSGNGSFPADIASKAAVNPSPDSDLQPVKPFQRRKPRTPGTRLRRHGGKRSRPETPLLKWKIHEDPLEEDQKSSVAGSRRKTCRSAKKQTEAAVSARRLAAGLWRLHLPETATGDGRKGLEHKHGNGHVGLQFLGHPNGMTHDSDTKKNLSQSPRSIFRTKNGHFCEPEPFKYPNTEMEGATKWDPLCSKTSDEAQHIYSHLKLLDQKASAVSVVSALGAELEQARARIQELESEHHSSKKKLEHFLKKVGEERAQWRTREHEKIRAYIDDIKAELNRERKNRQRIEVVNSRLVNELADAKLSAKRYMQDYEKERKARGLIEEVCDELAREIGEDKAEVEAMKRESMKLREEVDEERKMLQLAEVWREERVQMKLIDAKVALEEKYSQMNKLVIDLESFIRSKSAEPNTMEMREAQLLQQAAAAMNIQDIKGFSYEPPNSNDIFAIFEDANFGEANEREIEPCVSHSPASHASNIHMVSPEANVMTKNGIQRSSDVFMDDNGDIEGDESGWETVSHVEDQGSSYSPEGSAQSLNRNHRESNVSGRSVLEWEETGGEETPITEISEVCSIPTKQSKKVSSITRLWRSHPNNGDNYKIISVEGMDGRLSNGRLSNGVINMSPDHGSGKGGLSPQDLLYQLSPESGTPHAAHRGKKGCIPRTVQKNSLKARLLEARMESQKVQLRHVLKQKI 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01925 691 Coils Coil 327 361 - -
Cca05g01925 691 MobiDBLite consensus disorder prediction 37 51 - -
Cca05g01925 691 MobiDBLite consensus disorder prediction 52 79 - -
Cca05g01925 691 MobiDBLite consensus disorder prediction 518 549 - -
Cca05g01925 691 PANTHER GB|AAF24581.1 1 691 IPR043424 -
Cca05g01925 691 PANTHER ACTIN CYTOSKELETON-REGULATORY COMPLEX PAN-LIKE PROTEIN 1 691 - -
Cca05g01925 691 Coils Coil 271 291 - -
Cca05g01925 691 MobiDBLite consensus disorder prediction 1 91 - -
Cca05g01925 691 MobiDBLite consensus disorder prediction 518 564 - -
Cca05g01925 691 Coils Coil 217 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01925 Cca-Chr5 39074454 39078796 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01925 - - gmx:100795388 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01925 05 39074454 39078796 Cca09g01085 09 31819368 31828592 ECH
Cca05g01925 05 39074454 39078796 Cca05g01925 05 39074454 39078796 ECH