Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01035 ATGAGGTGGTGTTGCTGCACATCTTTTGTACTCTTTCTTACCCTTCTCATTCAGATACATGGAAGTGATCATTATGACCACAAGCAAGCAAAAGGCTCCGTAGAGAGAGGTTGTGACTTGTTTCAAGGAAGCTGGGTTTATAAGGAATCATACCCTCCTTATTATGAATCCTCACAATGTCCCTTTATAGAGAAGCAATTCGATTGTGAAAAGAATGGTAGACCAGATAAGTTCTATCTCAATTATAGATGGCAACCTACAGGGTGCAACTTACCAAGATTCAATGCTGAAGATTTCTTAAGAATACATAGAGGGAAAAGTATCATGTTTGTGGGGGACTCATTGAGTTTGAATCAATGGCAATCACTCACTTGCTTGCTTCACACAGCCTTGCCACATGCCCCATACACCAATGTGAGAAATGGAGCTCTCTCCATTTTCACCTTCCCGAGCTATGATGTTAAGTTGATGTTCTCACGCAATGCATTTTTGTTGGACATTGTTGCTGAAAAAATTGGTCGAGTTCTCCATCTAGATTCAATTTCAGCTGGCGAAACGTGGAAAGGAATAGATGTATTGATATTTGACTCTTGGCATTGGTGGCTTCACACAGGAAGAAAACAACCATGGGATTTCATTCGAGAAGGGAATCATATAGTAAGAGACATGGATCGCTTGGTAGTATATGGGAAAGCATTGAACACATGGGCCAAATGGATTGATAACAATATTGACCTTAAACAAACAAAGGTGTTCTTTCAAGGAGTCTCTCCAGATCATCAAGATTCAGAGCAATGGGGTGAGCCAGGAGCAAAAACTTGTGTAGGGCAAACTAGGCCAGTGTTGGGATCCAAGTATCCTGGAGGTCCAAGCCAAGCAGAGTTGGTGTTGGAAAAAGTGTTAGGAGCCATGCAAAAGCCTGTGCAATTGTTGAACATTACTACCCTATCACAGCTAAGGAAAGATGCCCACCCATCTGTTTATGGATTTGGAGGGCATAGGAGCTTGGATTGCACCCACTGGTGCCTAGCTGGGGTTCCTGATACTTGGAATGAGATTTTGTATGCTAGTCTCACTCAAAATTAA 1086 0.4208 MRWCCCTSFVLFLTLLIQIHGSDHYDHKQAKGSVERGCDLFQGSWVYKESYPPYYESSQCPFIEKQFDCEKNGRPDKFYLNYRWQPTGCNLPRFNAEDFLRIHRGKSIMFVGDSLSLNQWQSLTCLLHTALPHAPYTNVRNGALSIFTFPSYDVKLMFSRNAFLLDIVAEKIGRVLHLDSISAGETWKGIDVLIFDSWHWWLHTGRKQPWDFIREGNHIVRDMDRLVVYGKALNTWAKWIDNNIDLKQTKVFFQGVSPDHQDSEQWGEPGAKTCVGQTRPVLGSKYPGGPSQAELVLEKVLGAMQKPVQLLNITTLSQLRKDAHPSVYGFGGHRSLDCTHWCLAGVPDTWNEILYASLTQN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01035 361 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 10 359 IPR029962 GO:0016413
Cca09g01035 361 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 91 356 IPR026057 GO:0016740
Cca09g01035 361 Pfam PMR5 N terminal Domain 37 90 IPR025846 -
Cca09g01035 361 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 10 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01035 Cca-Chr9 30797915 30805881 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01035 - - gmx:100810342 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01035 09 30797915 30805881 Cca09g01035 09 30797915 30805881 ECH
Cca09g01035 09 30797915 30805881 Cca05g01904 05 38885844 38890411 PCT