Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01904 ATGGGGATATTGATTGTGCTGCTCATTTTGCTTTTCATTCATATACATGGCAATAATCATCACAAAGAGGCAAGAGGAAATTCACTGAGTTGTGATTTGTTTCAAGGTAACTGGGTTATTGATGATTCATACCCTCTTTATAATACCTCACAATGTCCATTTATTATCAAGGAATTTGATTGCCAAAAGAATGGTCGTCCTGATCAACTCTATGTCAAGTACAGATGGCAGCCCAAAAGCTGCAACTTACCAAGATTCAATGGTGAAGATTTCTTGAGAAGACTTAGAGGGAAAAGTATCCTGTTCGTGGGGGACTCTTTGAGTTTGAATCAATGGCAATCACTCACTTGCATGCTTCACATAGCTGTGCCACATGCAAATTACACTTCAGTTAGAACCGGAGGCTTATCTACCTTCACCTTCCCGAGTTATGATGTTAAGGTGATGCTTTCCCGTAACGCATTTTTGGTGGATACTGTAAATGAGAGTATTGGTAGAGTTCTGAAGTTAGATTCAATTGAAGGTGGAAAAATGTGGAAAGGAAATGACATACTGATATTCGACTCTTGGCATTGGTGGCTTCACGTAGGAAGAAAACAACCATGGGATTTCATTCAAGAAGGAAATCATACATACAAGGACATGGATCGTTTGGTTGCTTATGAGAAAGGCTTGAAAACATGGGCCAAATGGGTTGAAGACAATGTTGACCCTAACAAAACAAGGGTTTTCTTTCAAGGAGTATCTCCAGATCATCTCAATGGAGCAAAATGGGGGCAGCCAAGTGCAAGATTCTGTGAGGGGCAAACGGTGCCAGTATTTGGATTTGAGTATCCAGGGGGTACACACCCAGCTGAGTTAGTGTTAGAGAAAGTGTTAGGAGGCATGTCAAAGTCAAAGCATGTGTATTTGCTAAATATTACAACGTTGTCACAGATGAGGAAAGATGGTCACCCTTCTGTTTATGGACATGGTGGACACAGGGACATGGATTGCAGCCACTGGTGTCTACCTGGTCTTCCTGACACTTGGAATTTGCTTTTATATGCAGCTCTCCTTCAAAACTAA 1068 0.412 MGILIVLLILLFIHIHGNNHHKEARGNSLSCDLFQGNWVIDDSYPLYNTSQCPFIIKEFDCQKNGRPDQLYVKYRWQPKSCNLPRFNGEDFLRRLRGKSILFVGDSLSLNQWQSLTCMLHIAVPHANYTSVRTGGLSTFTFPSYDVKVMLSRNAFLVDTVNESIGRVLKLDSIEGGKMWKGNDILIFDSWHWWLHVGRKQPWDFIQEGNHTYKDMDRLVAYEKGLKTWAKWVEDNVDPNKTRVFFQGVSPDHLNGAKWGQPSARFCEGQTVPVFGFEYPGGTHPAELVLEKVLGGMSKSKHVYLLNITTLSQMRKDGHPSVYGHGGHRDMDCSHWCLPGLPDTWNLLLYAALLQN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01904 355 Pfam PMR5 N terminal Domain 30 82 IPR025846 -
Cca05g01904 355 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 83 350 IPR026057 GO:0016740
Cca05g01904 355 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 2 353 IPR029962 GO:0016413
Cca05g01904 355 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 2 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01904 Cca-Chr5 38885844 38890411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01904 - - gmx:100799085 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01035 09 30797915 30805881 Cca05g01904 05 38885844 38890411 PCT