Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01009 ATGGGCATCCTTGGAACAATGGCAAGACATATGGATACAATAGTGGGTAAATATAACAGATACGCATCAATGAGGGCAATTGAGAGTCCTTCAACCTTAGATGATCAGCAGTGGCTAACATATTGGGTTTTATACTCCTTCATCACCCTCTTTGAGCTTTCATGTTACAAGATCCTAGCATGGTTTCCAATTTGGCCATACATGAAGCTAGTGTTTTGCCTGTGGCTGGTATTGCCAATGTTCAATGGAGCTGCTTACATTTATGAAAACTTTGTGAGGCAATACATGAAGAACATAGGAAGCTACTATGGAAATTCCAAGTATCCTGAGGATCAAAAGAAAGTTCTTCAGATGATGAGTTTTGATGCAAGGAAAGCAGTTGAACGTTATATAGATACATATGGCTCTGAAGCTTTTGAGAGAGTAATTAGAGCAGCTGATAAAGAAGCAAGGAAGCACTGA 462 0.3939 MGILGTMARHMDTIVGKYNRYASMRAIESPSTLDDQQWLTYWVLYSFITLFELSCYKILAWFPIWPYMKLVFCLWLVLPMFNGAAYIYENFVRQYMKNIGSYYGNSKYPEDQKKVLQMMSFDARKAVERYIDTYGSEAFERVIRAADKEARKH 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01009 153 PANTHER HVA22-LIKE PROTEIN 17 152 - -
Cca09g01009 153 Pfam TB2/DP1, HVA22 family 21 95 IPR004345 -
Cca09g01009 153 PANTHER HVA22-LIKE PROTEINS 17 152 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01009 Cca-Chr9 30196641 30199269 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01009 K17279 - gmx:100819566 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01009 09 30196641 30199269 Cca05g01897 05 38794364 38795720 PCT