Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00408 ATGAAGTTCCATGACATTGAACTTCCCCTTGGGAGCACCACCCCAAAACACATGATCCCAAAGGTTACCTTCCTAGCAATCCTAGCCTTGCTACTATTTGCCATCACCCCAGTGAGCTACCCTTTGTTCAGTTACTCCTCACTCTTGAAGATCAACAAATATAAGCAACAACCCTCATCATATGATGGCTCAAATAACCTTCCCTCAACATATGTGGAAAAGTGTGACATTTTCAGTGGTGAATGGGTGCCAAATCCAAAGGCTCCATATTACACAAACAAAACATGTTGGGCAATTCATGAGCACCAAAATTGCATCAAGTATGGGAGGCCTGATTCTGAGTTCATCAAGTGGAGGTGGAAGCCTAATGACTGTGAACTCCCCATTTTCAACCCTTTTCAGTTTCTTGAAATTGTCAAAGGAAAATCCATGGCCTTTGTTGGAGACTCTGTGGGGAGAAATCAGATGCAGTCCATGATTTGCCTTCTCTCAAGGGTGGAATGGCCAATAGATGTATCCTACACTAATGATGAATATTTTAAGCGATGGAAGTACCCAAGTTACAACTTCACCATGGCAACATTTTGGACACCCCATTTGGTAAGAACCAAAATGGCAGATTCAAATGGTCCAACTAACACTGGCCTTTTCAATCTTTATCTGGATGAGTTTGATGATAAATGGACAACCCAAATTGAAGAATTTGACTACATCATTCTTGATGGAGGCCATTGGTTCTTCCGACCAATGGTGTTCTACGAGAAGAAAAAAATTGTTGGATGCCATTTTTGCCTCTTGGAAGATGTCCCTGATTTGACTATGTTCTATGGTTATAGAAAGGCTTTTAGGACTGCATTTAAAGCCATCAATAGTTTAGAAAACTTCAAGGGTGTAACATTTCTTAGAACATTTGCACCGTCTCATTTTGAGAATGGAATTTGGAATCAAGGTGGGAATTGTTTGAGAACTAAGCCATTTAGGAGTAGTGAGACAAGCTTAGAGGGCACTAATTTGGAGTTATATATGATCCAATTGGAAGAGTTTAAGATTGCTGAGAAGGAAGGTAGAAATAAGGGTTTGAAATTTAAGTTACTTGACACAACACAAGCAATGTTATTAAGACCAGATGGTCATCCAAGTAGATATGGACATTGGCCACATGAGAATGTGACATTATATAACGATTGTGTGCATTGGTGTTTGCCAGGACCTATAGACACGTGGAGTGATTTCTTGTTGGAAATGTTGAAGATGGAGGGCATTAGATCTGCAACAAGTTAA 1281 0.4005 MKFHDIELPLGSTTPKHMIPKVTFLAILALLLFAITPVSYPLFSYSSLLKINKYKQQPSSYDGSNNLPSTYVEKCDIFSGEWVPNPKAPYYTNKTCWAIHEHQNCIKYGRPDSEFIKWRWKPNDCELPIFNPFQFLEIVKGKSMAFVGDSVGRNQMQSMICLLSRVEWPIDVSYTNDEYFKRWKYPSYNFTMATFWTPHLVRTKMADSNGPTNTGLFNLYLDEFDDKWTTQIEEFDYIILDGGHWFFRPMVFYEKKKIVGCHFCLLEDVPDLTMFYGYRKAFRTAFKAINSLENFKGVTFLRTFAPSHFENGIWNQGGNCLRTKPFRSSETSLEGTNLELYMIQLEEFKIAEKEGRNKGLKFKLLDTTQAMLLRPDGHPSRYGHWPHENVTLYNDCVHWCLPGPIDTWSDFLLEMLKMEGIRSATS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00408 426 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 19 19 419 - -
Cca09g00408 426 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 127 415 IPR026057 GO:0016740
Cca09g00408 426 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 19 419 IPR029962 GO:0016413
Cca09g00408 426 Pfam PMR5 N terminal Domain 73 126 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00408 Cca-Chr9 9881362 9887855 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00408 - - gmx:100811842 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00408 09 9881362 9887855 Cca09g00408 09 9881362 9887855 ECH
Cca07g02390 07 52593036 52598037 Cca09g00408 09 9881362 9887855 PCT