Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01728 ATGGACTCCAATTCCTGGCGCCTCTCCGCCCCTTCACGCCGCTATCACTCTCGATCTGATCTGTTAGTGGAGGAGATTGAAGGCGGCGATGATTACAGGTCGGAGTTCCTCTGCCCTTTCTGCGCCGAGGATTACGACGTCGTTTCCCTCTGCTGCCACATTGACGACCACCACCCTATCCAAGCCAAAAACGGGGTGTGTCCCATCTGTGGGAAGGTGGGAGGAGATCTTGTGGGACATGTCACTACGCAACATGGGAACTTTTTGAGGGTGCAGCGTAAAAGGAGGGTCAGGAAAGGAGGCTCTACTTCACCAATTTCTATGTTGAAAAAAGAGTTACGAGAAGGAGCCTTGCACTCTATTCTTGGGGGTTCTTCACACATAGTTCCATCTGCTTCTGAGCCTGATCCTCTGTTGTCGTTATTTATGTTTAACCATGTTGTAGCTGATGAATCTGTGAGTGTACCATCTTGTCCTTCCATTGAAAATGCCCCTGTAAAAGAGAGGAGCTCAAAAGATGATTTCTTGGAAAGGTAA 537 0.4879 MDSNSWRLSAPSRRYHSRSDLLVEEIEGGDDYRSEFLCPFCAEDYDVVSLCCHIDDHHPIQAKNGVCPICGKVGGDLVGHVTTQHGNFLRVQRKRRVRKGGSTSPISMLKKELREGALHSILGGSSHIVPSASEPDPLLSLFMFNHVVADESVSVPSCPSIENAPVKERSSKDDFLER 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01728 178 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 178 IPR033347 -
Cca08g01728 178 Pfam Drought induced 19 protein (Di19), zinc-binding 35 86 IPR008598 -
Cca08g01728 178 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4 1 178 - -
Cca08g01728 178 Pfam Stress-induced protein Di19, C-terminal 106 173 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01728 Cca-Chr8 49179899 49182446 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01728 - - gmx:100499917 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01728 08 49179899 49182446 Cca08g01728 08 49179899 49182446 ECH
Cca08g01728 08 49179899 49182446 Cca02g01435 02 32896737 32899344 ECH