Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01435 ATGGACGGTGATTCCTCTTGGAGTGCTCGTCTCTCTTCCGCTTCCAGGCGCTACCAATCCGCTCTTCAATCTCGATCAGATATGTTCATGGGGTTTGATGAAAATGATGGGGACGATGATATAAGGGAGGAGTTTCTCTGCCCGTTTTGTTCTGAGTATTTTGATATTGTGGGATTATGCTGCCACATTGATGAAGAGCATCCGATGGAGGCAAGGAATGGGGTATGTCCAGTTTGTGCATTGAGGGTGGGGGTTGATATGGTAGCACACATAACCCTACAACATGGAAGTATATTTAAGATGCAGCGCAAAAGGAAATCACGTAAAGGTGGATCTTATTCAACACTATCTTTATTGAGGAAGGAGCTGCGAGAAGGAAATTTGCAATCCCTGTTCAGCGGATCTTCATGTATAGTGTCTTCGTCTAATGCAGCTGATCCACTGTTGTCATCATTTATATCGCCTTTAGCTAATGAACATACCAGTTCTCAGCACTTACACACCGAGACAAGATCATCTAAAAAATGCTCAGATCAGACTGTGTCAGCAAGAAATGTGGAGACACCAACCTTGTCTGTTAAGGATAAGGAGGAGAAGGAAAAAAGATGCGAGTTTGTTCAAGGACTGTTGCTGTCCACCATACTTGATGACAATTTATGA 660 0.4333 MDGDSSWSARLSSASRRYQSALQSRSDMFMGFDENDGDDDIREEFLCPFCSEYFDIVGLCCHIDEEHPMEARNGVCPVCALRVGVDMVAHITLQHGSIFKMQRKRKSRKGGSYSTLSLLRKELREGNLQSLFSGSSCIVSSSNAADPLLSSFISPLANEHTSSQHLHTETRSSKKCSDQTVSARNVETPTLSVKDKEEKEKRCEFVQGLLLSTILDDNL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01435 219 MobiDBLite consensus disorder prediction 160 193 - -
Cca02g01435 219 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4 1 217 - -
Cca02g01435 219 MobiDBLite consensus disorder prediction 175 189 - -
Cca02g01435 219 Pfam Stress-induced protein Di19, C-terminal 116 214 IPR027935 -
Cca02g01435 219 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 217 IPR033347 -
Cca02g01435 219 Pfam Drought induced 19 protein (Di19), zinc-binding 43 96 IPR008598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01435 Cca-Chr2 32896737 32899344 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01435 - - gmx:100795155 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01728 08 49179899 49182446 Cca02g01435 02 32896737 32899344 ECH
Cca02g01435 02 32896737 32899344 Cca02g01435 02 32896737 32899344 ECH