Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01650 ATGAAGGAGAATACTGAACTTGAGGAAGGAGAGGCATGCTATTATCAGGATGACGATGAAGCCAGCATTGACCCTGATTCCTTCTGTTACATTGATGAGAAGATTCAACATGTTCTTGGCCATTTTCAAAAGGACTTTGAAGGTGGTGTATCTGCTGAGAATTTGGGTGCAAAATTTGGTGGCTATGGTTCCTTTTTACCTACCCATGAGCGCTCTCCTTGTTTTTGGTCTCAACCTAGGTCTCCACAAAGAAACCACAGCTCACCAAAGTCGATTGTCAATCAACACATGGAGGTTGTGTCTCACGACACAAAAGCACCTTCCAGTGTGCCTTCTTCTGCAAGGCCTGAAAATGCTTCCCATAGTTCACATTCATTGCGTGATATTAGAGCAGCTTCAGTAAATGACTCAATGAAGAAAGAACAAGGAATTTCTTCCGTTGATACAGCTGAGAGGTGCACTTTAAAAGATGATACTACAAAAAAGACAGGAAAATCAACTGACCAAAGGACACTGAAGTTTCGATTCAAAATGAAATCCAGTATTTTAGCACAAAAGAATGCAGAAATTTATAGTGGCCTTGGGCTTGATAACTCTCCCTCTTCCTCAATGGGGAGCAGCCCTGTGGAAAGTGAAGGCATGCCACCGGTATCTCAAGAGAATGCTGAAGATTCTCCAACTCAAATTATTCAGGTCATGACTTCCTTTCCTATCCCGGGGGGTGTTCTAATATCACCACTACATGAAAGTTTCCTCAACTTGACAAAGAATGAAAAAGTTACTGGAGACAGCAGAGATTTGTCCTCTCTTAATGGTCATCAAGATCCCTGTTCCATGTCTGCTGATGAATCAAATTCTTTTGTGGGGGATGGGCATTTGAAGAAACAGACGGTGAGAATAGTGAGGCAGAGTGAAAAGCAGTTGGAATTGACGCATGTGAATGGAATCATTTCTGAGAAGGATATGACGTTGCACAAAAAGAAAAAATTAGGGAATAGAACACCAGATTGTAAAGATTTCCTCTCTAATGAGTTGAAATGGACACCTCTGTCAAGTTCAATTTGTGATGCTGGAGAAATTGCTGAAGTCACTGCTAAATCTTCTAAAGCCTCCAAGGAGATTAATGAGAATGGGGCACGAAGCAGAATGGTTACCATAGAAGCATTGAAGGAGGAGTCATTGGAGTCAATATCTGGTCAGGATATTGGGAAGACTGCAAAGCAAAATGCAGGAAATGGTTTTATGAAAAATGCTTTAGACCATAAACTTGAAAATTCGTGCAAGGATAATTCTATGAACCCTAAGAATATTAACATGTGTAATACTTTAATGATTTCCAATAAGATTGAACATGATGTAGTAAAACATAAGGTGGATCATAAGTATGAGATCCCTCAGAAGGTAAAGGCTGTATTTGAGTGGAGGAATAAGTCGAAAGTTGACCAGAGTCATGGAAAAGCTGAGGCTGTTGAAAGAAAAGACAGCTTTGGTGGTGCTAATAAAGCAATGATATTTGATAAAGGGAGTGCTGGCTCTGACAATAGTTGTAGAAGTAAAATGAATAAGTCAAATAACAGGGATTCATTGAAAGAAAAAAAATCTGAACGGAAAGTTGACAGTCTAGCTGGCAATGGTGCTGTAAAATACTCTAGCATTAATAATGGGAAACAGAGTGCATTTGGGGCTAAAGCAAAGGAAAGACCGAGTGGCCATAAAGTTGTTGACCAGTTGGCAGCTGTGCCATGCATAAAAGATACTTCAGCTTCACTTCCTAACCTTGCTCCGGAGATGATTTCATCAGCAGTAGCACCACCTCAGGTTATTTTAGAAGATTGGGTATGTTGTGACAGTTGCCAGCAATGGCGGCTACTACCTTATGGTATGAAGCCAGATCATCTTCCAGATAAATGGTTGTGTAGCATGCTAAATTGGCTGCCTAAGATGAATTCTTGCAACGTCAGCGAGGATGAGACAACAAAAGCACTTTATGCCATGTATCAAATGCCAATTTCTGAGGGTCAAAATAACATGCAAAGCCATGGTATTGAAACTGCACTTGGAGTGGGCTCTTCTGATTCTTTGCAATATGGCCTGAATCACAAAATGTCTAGCTCTGATATGTTGTCTGATCGAAGAAAGAAGAAACATGTTACTAAGGAAAAGACAATGTCAGGAATTAATAATGATGGGCTTCAGTTCCCAAATTCTGCAAAGATCAATAGTCAAATATCTGGAAAAAACAGAAGCTTGAATGGCATGAATCAGCATGCGGCTGCTGACTTAAACCCGATGAAGAAGATGAGTTCTTCTAAACATCTTAGCAGGCTTGAAAACATGATAGAAGAGAAACATGTGCCTAAAGATAAAGAAAAGCAAGTTAATGGAGGTGACAGAAAGCATTTTAAATTGAAACGTAAGATGGATCCTGATCAATATAAATCTGGAACTCCTAAGAAATCAAGAACTGAAAATGTTTGCCATGCTGACAAACAATTGAACCCTGGCATGGGCCTTGAGAAGGTGGCTCTATATTCAAAAAATGGTTTTCCAAAAAAAGCTAGTGGGAAGGATATGAGGAAGTATGATGAGTCTTGTTTATCTGAGGATGTACAGGTCAGGTTACCAGTCACTGCAAAGAAAGAGGGAGATCAAGCTCAGGTCTCGTCTGGTGGTGGGTCCTTGGATGTGAAAAGCAGCATTAGAAGTGATCGTTTAATGAAGAAAAGGAAATTGAAGGATCGACCAAATGATGAAAAGCAGTATGGTGAAGAGGGCAATGTAAGTGAATTTAGGAAGGAAAAGAAGCACAGAATTTTGAATAAAGAGGCAAAATCAGTAACTGAAGGTGATGATAAATTAAGTAAAGGTGGGATGAGGCAAGATTGCTTGTTAGGCAATAGGGGCCAAATGGCTAGTGCAACAGAGGTAAGATTTGCTGATAAATGCAACCAACCAAGGAAGCACAGGAAAAGTATCACATCACTTCATGCTTCAGATGGTATTGATTTGGGCTCTGGACCACTTTCATTGGCAGCAACATCTAGCTCTTCTAAAATATCAGGGTCTCATAAAGCTAAAACCAACTTTGAAGATGTGATTGGTTCACCTGTTGAATCTGTTACCTCGTCACCTTTGAGGGCCTCCAACTTGGATAAGAATATTTTGGCAGTAGGAGACACCTCAGTGAAAGGTGTTTCTACTAAAGGCTGTCTCCCTTCTGTAGGTTCCAGGAGAAGTGTGGATAACAAGGAGGGAAAGCTATTGGTAAAATTGGAGGGTAGAATTTCACACAACTTACATCTTGCATCCCACAAATCATCTTCAACCGAGTACCAGGTTGAGGATGCTAAAGACAGAGCCAGGGCCCAAGCTAAAAAATCTTCTGAACTAAAGAATAATCATTTGTTTGAAGGCAGTGTCCATGTTGAACAACCTGGCTATATTGCTAATGGTATATGTCATGATGAGAAAGTAAACAAGGACAACCAGGAAAGTGAACTTTCTTGGCAGAAATCTGGTAAGGTTACATCCTTACACAGCAAAGAGAATGGCAGAGAATCTGGCTCTCATGTTGGTAAAGGTAAGATGAAGATTTCAGTTTCAGAGACTGGTTATTCAAAAATTAGTGGGAGGTATGATTCAGCAGTTGATCCTAGTAATCATGCATCTGGTGCTAAGACAAAGAGTGATGCTAAATATACTTCTCCCAAGTCTAAAAGTGAAATTGACGGTATTAGTCAGAAAAGTGCTTTAAGACATGGTCTACATGAAACAAGAAAGCCAACTGAGCTAAACCAAAGAGACTTTGAGAATTCAGTTCCGAAGATGGATGCTCAATGCATTTCTGATAGAAAGACTATCTCCCATCAAAACCTGACTTGGGACTTTGAGGAAGAAAACAATGCTAATCATGTAAGCATTGAAACAAGCATTGGGAAATCTAAAGTTCTATCATCTGCTGTATCTGAAGTAAAAAGGGAAACATTGAATGTCGGTTCTAGAACTGGACCTCGGTATCAAAAGGGAGGCATGTCTAATGAGCATCCTGTCCATGTTTCTGGAAACTTTGTGCTTGATCAGCAAGTCACTGTGTCAAGTCCTCTGAGAACAAACTCTAACCAAACTGCTGTTGACACCCTGGAAGAAGCCACAAAACTAAAAGATAGAGCAGATAATTATAAGAACTCCGGGTTTGACTTTGAAAGCAATGAGACTTACTTTGAAGCTGGTTTGAAGTTTCTGCATGGAGCATCACTTTTAGAAAATTGTCACAATGAGAGTAGCAAGCATGGGGAAATGAGTCAAATGCAAATTTTGGCTACTGCAGCCAAACTTTTCAAATGCTGTGCCAGTGAATATGAAACACGCCAAGAAATGGCAGCTGCTGCTTTGGCATATAAATGCATGGAGGTGGCATACATGAGACTGGTTTACTGTAAAAATTCTAGTACTAATAGAGATCGGCATGAGTTGCAATCAGCTCTTCAAATGGTTTCTCAAGGTGAATCTCCATCATCTTCTGCATCCGATGTTGATAACCTTAACAATCAGGCAGCAGCAGATAAGGCTACTTTGCTTAGGGGTACTAATACTCATGTGGCTATCAACCAAGTCATACCTGCTCGAACTTGTCCGACTTTAGTCAGGCTTCTTGATTTTACTCAGGACATAAATTTTGCAATGGAGGCTTCTAGAAAATGTCAGAGCACTTTTGCGGCTGCTAATTTGGCCATGGAAGAAGCACGGAATAAGGACTGGATAACTTCCATTAGGAGCGTTATTGATTTCGGCTTCCAGGATGTAGATGAGCTTGTACGTCTGGTTTGGACTGCAACAAAAGCGATAAGTCGTGCCGGTCTTGGTGGTGCTAGAGATTAA 4878 0.4041 MKENTELEEGEACYYQDDDEASIDPDSFCYIDEKIQHVLGHFQKDFEGGVSAENLGAKFGGYGSFLPTHERSPCFWSQPRSPQRNHSSPKSIVNQHMEVVSHDTKAPSSVPSSARPENASHSSHSLRDIRAASVNDSMKKEQGISSVDTAERCTLKDDTTKKTGKSTDQRTLKFRFKMKSSILAQKNAEIYSGLGLDNSPSSSMGSSPVESEGMPPVSQENAEDSPTQIIQVMTSFPIPGGVLISPLHESFLNLTKNEKVTGDSRDLSSLNGHQDPCSMSADESNSFVGDGHLKKQTVRIVRQSEKQLELTHVNGIISEKDMTLHKKKKLGNRTPDCKDFLSNELKWTPLSSSICDAGEIAEVTAKSSKASKEINENGARSRMVTIEALKEESLESISGQDIGKTAKQNAGNGFMKNALDHKLENSCKDNSMNPKNINMCNTLMISNKIEHDVVKHKVDHKYEIPQKVKAVFEWRNKSKVDQSHGKAEAVERKDSFGGANKAMIFDKGSAGSDNSCRSKMNKSNNRDSLKEKKSERKVDSLAGNGAVKYSSINNGKQSAFGAKAKERPSGHKVVDQLAAVPCIKDTSASLPNLAPEMISSAVAPPQVILEDWVCCDSCQQWRLLPYGMKPDHLPDKWLCSMLNWLPKMNSCNVSEDETTKALYAMYQMPISEGQNNMQSHGIETALGVGSSDSLQYGLNHKMSSSDMLSDRRKKKHVTKEKTMSGINNDGLQFPNSAKINSQISGKNRSLNGMNQHAAADLNPMKKMSSSKHLSRLENMIEEKHVPKDKEKQVNGGDRKHFKLKRKMDPDQYKSGTPKKSRTENVCHADKQLNPGMGLEKVALYSKNGFPKKASGKDMRKYDESCLSEDVQVRLPVTAKKEGDQAQVSSGGGSLDVKSSIRSDRLMKKRKLKDRPNDEKQYGEEGNVSEFRKEKKHRILNKEAKSVTEGDDKLSKGGMRQDCLLGNRGQMASATEVRFADKCNQPRKHRKSITSLHASDGIDLGSGPLSLAATSSSSKISGSHKAKTNFEDVIGSPVESVTSSPLRASNLDKNILAVGDTSVKGVSTKGCLPSVGSRRSVDNKEGKLLVKLEGRISHNLHLASHKSSSTEYQVEDAKDRARAQAKKSSELKNNHLFEGSVHVEQPGYIANGICHDEKVNKDNQESELSWQKSGKVTSLHSKENGRESGSHVGKGKMKISVSETGYSKISGRYDSAVDPSNHASGAKTKSDAKYTSPKSKSEIDGISQKSALRHGLHETRKPTELNQRDFENSVPKMDAQCISDRKTISHQNLTWDFEEENNANHVSIETSIGKSKVLSSAVSEVKRETLNVGSRTGPRYQKGGMSNEHPVHVSGNFVLDQQVTVSSPLRTNSNQTAVDTLEEATKLKDRADNYKNSGFDFESNETYFEAGLKFLHGASLLENCHNESSKHGEMSQMQILATAAKLFKCCASEYETRQEMAAAALAYKCMEVAYMRLVYCKNSSTNRDRHELQSALQMVSQGESPSSSASDVDNLNNQAAADKATLLRGTNTHVAINQVIPARTCPTLVRLLDFTQDINFAMEASRKCQSTFAAANLAMEEARNKDWITSIRSVIDFGFQDVDELVRLVWTATKAISRAGLGGARD 1625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01650 1625 MobiDBLite consensus disorder prediction 100 126 - -
Cca08g01650 1625 MobiDBLite consensus disorder prediction 508 540 - -
Cca08g01650 1625 MobiDBLite consensus disorder prediction 1102 1130 - -
Cca08g01650 1625 MobiDBLite consensus disorder prediction 909 953 - -
Cca08g01650 1625 MobiDBLite consensus disorder prediction 1211 1265 - -
Cca08g01650 1625 MobiDBLite consensus disorder prediction 1178 1192 - -
Cca08g01650 1625 ProSiteProfiles Zinc finger CW-type profile. 606 659 IPR011124 GO:0008270
Cca08g01650 1625 MobiDBLite consensus disorder prediction 195 221 - -
Cca08g01650 1625 Coils Coil 1113 1133 - -
Cca08g01650 1625 MobiDBLite consensus disorder prediction 878 953 - -
Cca08g01650 1625 PANTHER CW-TYPE ZINC-FINGER PROTEIN 1 1620 - -
Cca08g01650 1625 MobiDBLite consensus disorder prediction 262 285 - -
Cca08g01650 1625 MobiDBLite consensus disorder prediction 1163 1198 - -
Cca08g01650 1625 MobiDBLite consensus disorder prediction 1250 1265 - -
Cca08g01650 1625 Gene3D - 608 661 - -
Cca08g01650 1625 PANTHER CW-TYPE ZINC FINGER 1 1620 - -
Cca08g01650 1625 MobiDBLite consensus disorder prediction 882 896 - -
Cca08g01650 1625 MobiDBLite consensus disorder prediction 523 539 - -
Cca08g01650 1625 Pfam CW-type Zinc Finger 612 657 IPR011124 GO:0008270
Cca08g01650 1625 MobiDBLite consensus disorder prediction 1110 1130 - -
Cca08g01650 1625 MobiDBLite consensus disorder prediction 262 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01650 Cca-Chr8 48028155 48036501 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01650 - - gmx:102667636 2417.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02794 11 55288532 55296978 Cca08g01650 08 48028155 48036501 PCT