Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01510 ATGGGAGGCTGTTTTTCCTCCAAACCATCCTCCAAATTCAACAATAGTGTTCGTTTGGTTCATCTCAGTGGCTATGTGGAGGATTTTGAGGAGCCAATTTCAGTGAAACAAGTCACAGGCACACCCTCAAAGCACTTTGTTTGTACCTCAGTTCAGCTTCTTTCATCTAGCTCAAAGCCACTGAATGGAGACACACAACTCCAACGTGGGAATGTGTACTTCATGCTACCTTACTCAATTCTCCAAACTGATGTCTCTCCTGTGAACTTGGCTTCCCTTGCAAAGAGGCTCACTGCAATAGCCAACACAAGCAAATGTGAGGACAAAAAGTCCTCTCTCAAAGATGGTCCTTTTTCAAGCCATGTTTGGAGTTCTTCACCTTCAAGGAGCCCTGGCAGGCTTGAGCAAATTGGCCGAAGCCCGTGTCGAATGCAGCCATGGAAACCTATCTTGGACACCATCAGAGAGAAGTCCTTCAATAAGAGGAGTGAGTCAGATTTGCAAGAATATAACTGA 516 0.4535 MGGCFSSKPSSKFNNSVRLVHLSGYVEDFEEPISVKQVTGTPSKHFVCTSVQLLSSSSKPLNGDTQLQRGNVYFMLPYSILQTDVSPVNLASLAKRLTAIANTSKCEDKKSSLKDGPFSSHVWSSSPSRSPGRLEQIGRSPCRMQPWKPILDTIREKSFNKRSESDLQEYN 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01510 171 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 167 - -
Cca08g01510 171 Pfam PADRE domain 1 156 IPR025322 -
Cca08g01510 171 PANTHER OS06G0700300 PROTEIN 1 167 - -
Cca08g01510 171 MobiDBLite consensus disorder prediction 117 133 - -
Cca08g01510 171 MobiDBLite consensus disorder prediction 106 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01510 Cca-Chr8 44513674 44514748 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01510 - - gmx:100810460 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01510 08 44513674 44514748 Cca08g01510 08 44513674 44514748 ECH
Cca11g02426 11 51218845 51219815 Cca08g01510 08 44513674 44514748 PCT