Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01462 ATGGATGAAGCAGCAGGAGCTTCGGTTTACGCTGCCATGGCAAGTTGGTTCACACCCTCGTATCTATTCGTCTTCATCAACCTCGTCATCGGCACCATAGCTATCACCACTCGTTTCGccaacaccacagaaaagcatcaccaacaccaacaccaacacctccaccGTTCTCCCTCCCTGCTAGAACGCATCGCGTCCTTCAACTTCCGTTACCACAAGCACGAGCAAATATCAACAACGCCTCACGACGTTGTTGATCCGGTCCAGAGTCTGGACTCGTCTCAACTCGAGCGGGTTCCGTCTTTGTTGGACCGGGTCAGGTCATTTAGTCTCGACTTTACAAAAGTCGAGACTAAAGAACCTGTTGAGCCGGTCCAGAATTCGGACTTGCTCCCACTCGAGCGGGCTCCATCCTTGCTGGACCGGATTAGGTCATTCAATCTGAACTTTACAGAAGCTCAGGTTGAAGAACATGATGAACCGGTCCAGCAGCAACTGAGCCGTACTTCGTCCCTGTTGGACTGTGTAATGTCTTTCAACCTCGGCTTTATAAAAACTGAGGTTGAAAAACCTGATGAACCGGAGCCAGCTCAGCAACAACTGAGGCGAGCTCCGTCGATCCTTCAGCGGATTAAGTCTTTGACGTTTGAAAGATCGGAGTCGGTGAAGGATTCACATGAGGCTGAGGAAAGGGAAGAAGAGGAAGGGGTGGACGCGAAGGCCGATGATTTCATCAACAGGTTTAGGCAGCAACTGAGGTTGCAGAGGCTTGATTCTATTCTACGTTACAGGGATACGCTCAAACGAAACTGA 813 0.4736 MDEAAGASVYAAMASWFTPSYLFVFINLVIGTIAITTRFANTTEKHHQHQHQHLHRSPSLLERIASFNFRYHKHEQISTTPHDVVDPVQSLDSSQLERVPSLLDRVRSFSLDFTKVETKEPVEPVQNSDLLPLERAPSLLDRIRSFNLNFTEAQVEEHDEPVQQQLSRTSSLLDCVMSFNLGFIKTEVEKPDEPEPAQQQLRRAPSILQRIKSLTFERSESVKDSHEAEEREEEEGVDAKADDFINRFRQQLRLQRLDSILRYRDTLKRN 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01462 270 PANTHER COTTON FIBER (DUF761) 218 269 - -
Cca08g01462 270 PANTHER COTTON FIBER (DUF761) 7 76 - -
Cca08g01462 270 MobiDBLite consensus disorder prediction 218 239 - -
Cca08g01462 270 Pfam Cotton fibre expressed protein 235 269 IPR008480 -
Cca08g01462 270 PANTHER DUF4408 DOMAIN PROTEIN 218 269 - -
Cca08g01462 270 PANTHER DUF4408 DOMAIN PROTEIN 7 76 - -
Cca08g01462 270 Pfam Domain of unknown function (DUF4408) 8 39 IPR025520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01462 Cca-Chr8 43354519 43355997 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01462 - - gmx:100781094 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01462 08 43354519 43355997 Cca08g01462 08 43354519 43355997 ECH
Cca11g02477 11 51939765 51940436 Cca08g01462 08 43354519 43355997 PCT