Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01370 ATGAGCATGATACCAATCATTAGCAAACTATACTGTTCATCTTCTCAGACGGTGCTGGAGGTTAGGAAGAGGCCACATGTGGTGAATGGAGGGGGTTTTGTGGTCACGGATTGCAGTGGCCAAAGGGTTGTTTTCAGGGTTGATGGCTGTGGGATTCATGGCACAAAGGGACAGTTGATTCTAAGAGATGGTGAAGGAGATGCTTTACTTCTCATCCGTCGAAAGGGAGGCATGGTTGAGGCCCTTAGCATTTACAAGAAGTGGAGAGGTTATAGTCTAGACTATGAAGGATTACAGAACCTGGTTTTCAGCTTGAAGGAACCCAATTCTTGTTTGGTTAAGAACAATGGGATTAGAATCTCCAGTGAGCCAAAGGCTGCTAGTAACAAAGGCTGGGACTTTGAGATCAGAGGTTATTTCCCAGATAGGAGTTGTAGCATTGTTGACATTAGGGGCAATGTAATAGCCCAGGTGGGGGTGAACAAGGAAGTGGAGAAATTGATGGCAAGTAAGGATCTGTATCATGTGGTGGTGAAACCTGGGATGGATCAAGCGTTTGTTTTTGGAGTCATTGCCATTCTTGACTACATTTATGGCGAATCCACGTATTGTTGA 615 0.4488 MSMIPIISKLYCSSSQTVLEVRKRPHVVNGGGFVVTDCSGQRVVFRVDGCGIHGTKGQLILRDGEGDALLLIRRKGGMVEALSIYKKWRGYSLDYEGLQNLVFSLKEPNSCLVKNNGIRISSEPKAASNKGWDFEIRGYFPDRSCSIVDIRGNVIAQVGVNKEVEKLMASKDLYHVVVKPGMDQAFVFGVIAILDYIYGESTYC 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01370 204 PANTHER - 4 203 IPR007612 -
Cca08g01370 204 SUPERFAMILY Tubby C-terminal domain-like 5 198 IPR025659 -
Cca08g01370 204 PANTHER PROTEIN LURP-ONE-RELATED 6 4 203 - -
Cca08g01370 204 Pfam LURP-one-related 7 193 IPR007612 -
Cca08g01370 204 Gene3D - 5 202 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01370 Cca-Chr8 41196836 41198637 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01370 - - gmx:100817988 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01370 08 41196836 41198637 Cca08g01370 08 41196836 41198637 ECH
Cca11g02547 11 52623006 52624418 Cca08g01370 08 41196836 41198637 PCT