Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01295 GCTTGGGAAGGGCGGGCTTATGACTACTGTATGGAAAACCTCAAGAAAATGGGCTTCCCTGTTGATGGACTTGCATTTGATCCAGACTTGGTTATTAGAGGCCTTGTCATTGATAAAGAGAAAGGCAATTTGGTTAAACTTGATCGATTTGGTTATATAAAAAGAGCCATGCATGGAACCAAAATGTTATCTACGCATGCTGTGAGTGAGATATATGGGAGAGAACTGGTGGACCTGCGGGAGGAGAATCGATGGGAGTTTCTCAACACATTGTTCTCTGTGTCTGAAGCTGTGGCTTACATGCATATGGTTGACAAATTGGAAGATGGGGTTATACCATCCAATCTTGGCTCCTTTGATTATAAAAGGCTTTATAAGGCTGTTGGAAAAGCTCTCTTCACAGCACACGTGGAAGGTCGCCTCAAGAGTGAGATTATGTCTAACCCCGAACAATTTGTGGAACCTGATCCAGAAATTCCCTTCACACTTTTGGATCAGAAAGAGGCAGGCAAAAAACTTCTGCTTATTACAAACTCAGATTATCATTATACAGACAGAATGATGCATTATTCATTTAATAGATTCCTTCCGAATAGCATGGGTTGGCGAGATTTATTTGACGTTGTAATTGTCTCGGCACAAAAACCAGAATTCTTCCAAATGTCACACCCCATGTATGAAGTGGTGACAGATGATGGTCTGATGCGTCCATGCTTTAAAGCTCAAACTGGTGGTGTGTACTCAGGGGGGAGCGCGCAGATGGTTGAAAATTCCCTAAATATACACGGAGACGAGATACTGTATATTGGTGACCATATTTACACTGATGTTAGTCAATCTAAAGTCCATTTGCGATGGCGAACAGCATTGATTTGTCGGGAACTGGAAGAAGAGCACAGTGCCCTAATTCTTAGCCTGGGTCATAGAAAATCATTGGTGGAGCTTATAAATCAAAAGGAGGTTATAGGTGGTCTCTTTAACCAGCTACGGCTGACTCTGCAGCGGCAAAGTACAGGGCATCCTGCTCATACTGTTGCTCAAACTAAATTGGAGGATGAAAAACTTACTGAAAGCATGCAAAAGCTACATATTGTTATGAAAAGACTAGATGGAAAAATTGCTCCAATGCTAGAGGCAGATGGGGAGCTCTTCAATAAAAGGTGGGGCTATCTATCACGTGCTGGTTTGTGGGATAAAAGCCACTTGATGAGACAAATTGAGAAGTATGCAGATATATATACTTCTAGGGTGTCAAATTTTTTACATTACACACCCTTTATGTATTTCCGCTCTCAGGAACAGAACCTTGCACATGATTCATACACACACTATTGTTCACAAGTTGTCAAGTTTCCTTCCTATGGTAAATTGGACCAAAATAGAGAAATATAG 1392 0.4131 AWEGRAYDYCMENLKKMGFPVDGLAFDPDLVIRGLVIDKEKGNLVKLDRFGYIKRAMHGTKMLSTHAVSEIYGRELVDLREENRWEFLNTLFSVSEAVAYMHMVDKLEDGVIPSNLGSFDYKRLYKAVGKALFTAHVEGRLKSEIMSNPEQFVEPDPEIPFTLLDQKEAGKKLLLITNSDYHYTDRMMHYSFNRFLPNSMGWRDLFDVVIVSAQKPEFFQMSHPMYEVVTDDGLMRPCFKAQTGGVYSGGSAQMVENSLNIHGDEILYIGDHIYTDVSQSKVHLRWRTALICRELEEEHSALILSLGHRKSLVELINQKEVIGGLFNQLRLTLQRQSTGHPAHTVAQTKLEDEKLTESMQKLHIVMKRLDGKIAPMLEADGELFNKRWGYLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLHYTPFMYFRSQEQNLAHDSYTHYCSQVVKFPSYGKLDQNREI 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01295 463 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 2 305 IPR008380 -
Cca08g01295 463 PANTHER HAD-SUPERFAMILY HYDROLASE, SUBFAMILY IG, 5'-NUCLEOTIDASE 1 448 - -
Cca08g01295 463 Gene3D - 131 321 IPR023214 -
Cca08g01295 463 SUPERFAMILY HAD-like 2 441 IPR036412 -
Cca08g01295 463 Pfam 5' nucleotidase family 2 440 IPR008380 -
Cca08g01295 463 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 1 448 IPR008380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01295 Cca-Chr8 38935715 38964693 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01295 - - vun:114174902 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01295 08 38935715 38964693 Cca08g01295 08 38935715 38964693 ECH
Cca11g02627 11 53553372 53560792 Cca08g01295 08 38935715 38964693 PCT