Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01185 ATGGCTCTCATGGGCTTGTTGGGTtttgttgctttgatcctttctttctttctCTTACAATTTATGTCCCTTCAAGCACACGCATCAAGCCGTGCCTTTCATGGAAGAAAATACGTCGCAGCTCAACCTCCACTTCATGGCTTATGCACCTCTTCTGTCACCATTCATGGATACAAATGTCAGGAACTTCAAGTTACAACAAAAGATGGGTACATTCTTAGCCTTCAAAGGATCCCTCAAGGTCGAGGTGAGGTTAGTGGCGGTGTGACCAAGAAACAGCCAGTGATACTACATCATGGAGTATTGGTGGATGGAATGACATGGCTTCTGAATCTTCCAGAGCAAAACCTGCCCTTGATTCTAGCTGATAATGGCTTTGATGTGTGGATTGCTAACGCCAGAGGAACAAGATATAGCTGCAGACACACCTCTCTGGATCCCTCTAGCCCAGACTATTGGAATTGGTCTTGGGATGAAATGGTGACTTATGATCTGCCTGCTATTTTTGATTATGTGTCCAACCAAACAGGGCAGAAGATAAATTTCGTGGGCCATTCTTTGGGAACTTTGGTAGCTTTGGCATCCCTCTCTGAAGGGAAATTGGTGAATCAGGTAAAATCAGTAGCCCTATTAAGTCCAGTTGCATATCTGAGCCACATGAGGACAGCACTTGGAGTTATTGCTGCAAACTCCTTTGTTGGTGAGATCATCAACCTTATTGGTATGGCAGAATTTGATCCAAAAGGGTTACCTGTTGTTGACTTTATCAAGTCTCTCTGCCTTTACCCTGGGTTAGACTGCACAAACTTGTTTACTGCAATAACTGGTGAAAATTGCTGCCTCAATTCTTCAACTGTTGATCTATTCATGGAGAATGAACCTCAGCCAACATCAACAAAGAACATGGTGCACTTGTCTCAGACTGTTAGACTTGGGGTTTTGACAAAATTCAACTATGAGAGACCAGAGTATAATATTATGCATTATGGAGAAATTTATCCTCCAATCTATAACCTTTCCAATATCCCCCATAACCTCCCTCTCTTCATAAGCTATGGTGGCAAAGATGCACTCTCAGATGTTATTGATGTAAGAAATATGCTTGATCACTTGAAGTTCCATGATGAAGACAAGCTAAGTGTTCAGTTCATCGAGGAATATGCTCATGCTGACTACATTATGGGGGTCAATGCCAAGGACATGGTGTACAATGTTGTTACTGCATTTTTCAAGCATCAATTTTAA 1245 0.4129 MALMGLLGFVALILSFFLLQFMSLQAHASSRAFHGRKYVAAQPPLHGLCTSSVTIHGYKCQELQVTTKDGYILSLQRIPQGRGEVSGGVTKKQPVILHHGVLVDGMTWLLNLPEQNLPLILADNGFDVWIANARGTRYSCRHTSLDPSSPDYWNWSWDEMVTYDLPAIFDYVSNQTGQKINFVGHSLGTLVALASLSEGKLVNQVKSVALLSPVAYLSHMRTALGVIAANSFVGEIINLIGMAEFDPKGLPVVDFIKSLCLYPGLDCTNLFTAITGENCCLNSSTVDLFMENEPQPTSTKNMVHLSQTVRLGVLTKFNYERPEYNIMHYGEIYPPIYNLSNIPHNLPLFISYGGKDALSDVIDVRNMLDHLKFHDEDKLSVQFIEEYAHADYIMGVNAKDMVYNVVTAFFKHQF 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01185 414 SUPERFAMILY alpha/beta-Hydrolases 54 411 IPR029058 -
Cca08g01185 414 PANTHER TRIACYLGLYCEROL LIPASE 2 17 413 - -
Cca08g01185 414 Gene3D alpha/beta hydrolase 38 412 IPR029058 -
Cca08g01185 414 Pfam Partial alpha/beta-hydrolase lipase region 53 111 IPR006693 GO:0006629
Cca08g01185 414 PIRSF Steryl_ester_lip 2 414 IPR025483 GO:0016788
Cca08g01185 414 PANTHER LYSOSOMAL ACID LIPASE-RELATED 17 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01185 Cca-Chr8 34011990 34018080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01185 44 411 Acyl Lipid Metabolism Gene Families AT2G15230 36.957 2.60e-91 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01185 K01052 - gmx:100779460 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00848 07 14292589 14298686 Cca08g01185 08 34011990 34018080 PCT