Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00848 ATGAAGCACACGCTTCAAACCGTGGCTCCTTTAGGCAGAAACATCGTCATCCCTCCATCGTTTGGCATATGTGCCTCTTCTGTCATCGTGCATGGATACAAGTGCCAAGAACATGAGGTTACAACCAATGATGGGTACATTCTGAGCCTGCAAAGGATCCCAGAAggtcgaggtggtggtggtggtgCCAGTGGCACTAGGAAGCAACCAGTGATCATACAGCATGGTGTTCTTGTGGATGGTATGACATGGCTTCTGAACCCTCCAGAGCAAGACCTGCCTTTGATTTTAGCTGATAATGGGTTTGATGTTTGGATTGCTAACACAAGAGGAACAAGATATAGCCGACGCCACATCTCATTGGACCCCTCTAGCCCGGCCTTTTGGAATTGGTCCTGGGATGAACTTGTTTCCTATGATCTCCCTGCTGTGTTTGATTATGTCTTCAGCCAAACGGGGCATAAGATCAATTACGTTGGCCATTCCCTGGGAACTTTGATAGCTTTGGCTTCCTTCTCAGAAGGGAAATTGGTTAACCAGCTGAAATCAGCAGCCCTGTTGAGCCCTATAGCCTATTTAAGCCACATGCACACCGCACTTGGTGTTATTGCAGCTAGGTCCTTTATTGGTGAGATCACTACCCTCTTTGGTTTGGCTGAATTTAATCCAAAAGGGTTACCTGTTGAAGCCTTTCTCAAGTCTCTCTGCAATCACCCTGGGATAGACTGCTATAACTTGTTGACGGCATTAACTGGTAAAAATTGCTGTCTTAATTCTTCAACTGTTGATCTATTCTTGATGAATGAGCCTCAGTCAACATCAACAAAGAACATGGTGCACTTGGCTCAGACTGTGAGACATGGGGTGTTGGCAAAATTTAATTATGTGAGACCAGACTATAACATCATGCATTATGGAGAAATATTCCCTCCAATCTACAACCTTTCCAATATCCCTCATGACCTCCCTCTCTTCATTAGCTATGGTGGCAGAGATGCACTTTCAGATGTTCGTGATGTTGAGAATTTGCTTGATATACTCAAGAACCATGATGAGGATAAGCGTAGTGTTCAGTTCATCCAGGAATATGCTCATGCTGACTACATTATGGGGTTCAATGCCAAGGACTTGGTGTATAATGATGTTGTTTCGTTTTTCAATCGTCAAGTTAACGCTTGA 1179 0.4317 MKHTLQTVAPLGRNIVIPPSFGICASSVIVHGYKCQEHEVTTNDGYILSLQRIPEGRGGGGGASGTRKQPVIIQHGVLVDGMTWLLNPPEQDLPLILADNGFDVWIANTRGTRYSRRHISLDPSSPAFWNWSWDELVSYDLPAVFDYVFSQTGHKINYVGHSLGTLIALASFSEGKLVNQLKSAALLSPIAYLSHMHTALGVIAARSFIGEITTLFGLAEFNPKGLPVEAFLKSLCNHPGIDCYNLLTALTGKNCCLNSSTVDLFLMNEPQSTSTKNMVHLAQTVRHGVLAKFNYVRPDYNIMHYGEIFPPIYNLSNIPHDLPLFISYGGRDALSDVRDVENLLDILKNHDEDKRSVQFIQEYAHADYIMGFNAKDLVYNDVVSFFNRQVNA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00848 392 PANTHER TRIACYLGLYCEROL LIPASE 2 18 389 - -
Cca07g00848 392 Gene3D alpha/beta hydrolase 22 388 IPR029058 -
Cca07g00848 392 PANTHER LYSOSOMAL ACID LIPASE-RELATED 18 389 - -
Cca07g00848 392 SUPERFAMILY alpha/beta-Hydrolases 31 387 IPR029058 -
Cca07g00848 392 PIRSF Steryl_ester_lip 3 391 IPR025483 GO:0016788
Cca07g00848 392 Pfam Partial alpha/beta-hydrolase lipase region 30 87 IPR006693 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00848 Cca-Chr7 14292589 14298686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00848 19 392 Acyl Lipid Metabolism Gene Families AT2G15230 37.931 3.84e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00848 K01052 - gmx:100779460 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00848 07 14292589 14298686 Cca08g01185 08 34011990 34018080 PCT