Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01184 ATGGGGCACAAGAACACAATTTTCCTGGCTCTCGTAGCTACCTTGATTGCAAAGGAGGCCTTTGCAGCACAACATGTAGTTGGTGGAAGCCAAGGCTGGGATCAATCTACAGATTTTAAGACATGGATTTCAGGCCAAACATTCAAGGTTGGAGATAAACTTGTTTTCAAGTACACTTCTTTGCATAGTGTGGTTGAACTAGGCAGTGAGAGTGCCTACAAGAATTGTGATATTAGCAGTCCAATCAAGTCCTTGAGCACTGGCAACGATGTTGTGAAACTGGACAAGCCAGGTACAAGGTACTTTACTTGTGGTACCTTGGGACACTGTAGTCAAGGGATGAAGGTGAAAATTACCACAGTGAAAGGGAATGCACTTTCTCCTGcatcatcaccatcaccatcatcgtcaccgttatcatcatcttcaccttcatcatcaccatcttcttcTACTACCACTACAACCGATACATCTTCAGCCTCACAATGCTTCACCTCATTCATTTTCATTCTTGCATTATCAGTCACAATAATGATTTCCTTGTTTTAA 552 0.3714 MGHKNTIFLALVATLIAKEAFAAQHVVGGSQGWDQSTDFKTWISGQTFKVGDKLVFKYTSLHSVVELGSESAYKNCDISSPIKSLSTGNDVVKLDKPGTRYFTCGTLGHCSQGMKVKITTVKGNALSPASSPSPSSSPLSSSSPSSSPSSSTTTTTDTSSASQCFTSFIFILALSVTIMISLF 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01184 183 MobiDBLite consensus disorder prediction 125 159 - -
Cca08g01184 183 SUPERFAMILY Cupredoxins 22 120 IPR008972 -
Cca08g01184 183 CDD Phytocyanin 23 119 - -
Cca08g01184 183 PANTHER BNAA06G32330D PROTEIN 7 174 - -
Cca08g01184 183 ProSiteProfiles Phytocyanin domain profile. 23 122 IPR003245 GO:0009055
Cca08g01184 183 PANTHER BLUE COPPER PROTEIN 7 174 IPR039391 GO:0009055
Cca08g01184 183 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Cca08g01184 183 Gene3D - 21 126 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01184 Cca-Chr8 34009879 34011456 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01184 7 121 Miscellaneous Gene Families AT3G27200 63.478 1.68e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01184 - - gmx:100306337 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01184 08 34009879 34011456 Cca07g00849 07 14300420 14301385 PCT