Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00849 ATGGGGCGCATGAACACAATTTTTTTGGCACTATTTGTTGCTTTGATCACAAAGGATGCCATGGCAGAACAACATGTAGTTGGTGGAAGCCAAGGTTGGGATGAATCCACAGACTTTAATTCCTGGGTTTCAGGCCAAACATTTAAGGTTGGAGATCAACTTGTTTTCAAGTACTCTTCTTTGCATAGTGTGGTTGAGCTAGGTAGTGAGAGTGAGTACAAGAATTGTGATATTGGCAATGCAGTGAACTCAATGAGCAGTGGCAATGATGTTGTGAAACTGAGCAAGCCTGGCACACGTTACTTTGCATGTGGCACATTGGGGCATTGTGGTCAAGGCATGAAGGTGAAGATTAAAACAGTGTCTGGGAACtcttcctcttcttcatcatcttcttcttcttcttcacctgcatcatcttcAGCCTCACAGGGCTTCATCTCTCTTGTGCTCATTGTTGCTATGTTGATTGCCTCTCTTAACCAGTTTTGA 492 0.3923 MGRMNTIFLALFVALITKDAMAEQHVVGGSQGWDESTDFNSWVSGQTFKVGDQLVFKYSSLHSVVELGSESEYKNCDIGNAVNSMSSGNDVVKLSKPGTRYFACGTLGHCGQGMKVKIKTVSGNSSSSSSSSSSSSPASSSASQGFISLVLIVAMLIASLNQF 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00849 163 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Cca07g00849 163 Gene3D - 21 127 IPR008972 -
Cca07g00849 163 CDD Phytocyanin 24 119 - -
Cca07g00849 163 SUPERFAMILY Cupredoxins 21 120 IPR008972 -
Cca07g00849 163 PANTHER BLUE COPPER PROTEIN 7 135 IPR039391 GO:0009055
Cca07g00849 163 PANTHER BNAA06G32330D PROTEIN 7 135 - -
Cca07g00849 163 ProSiteProfiles Phytocyanin domain profile. 23 122 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00849 Cca-Chr7 14300420 14301385 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00849 3 121 Miscellaneous Gene Families AT3G27200 66.116 6.42e-57 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00849 - - gmx:100305865 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00849 07 14300420 14301385 Cca07g00849 07 14300420 14301385 ECH
Cca08g01184 08 34009879 34011456 Cca07g00849 07 14300420 14301385 PCT