Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01154 ATGGAAAAATCCAACCTGAATCCAAAATCACCCACCAAAGATAGAAATGCATATTTTTCTTCTCCTCATCTCACACATGATCAACCAAACAAATTTGAACCACACCATAGTGGACTTAGAGCTCTAGACCATGAGGTTAACGATTTTGATGCATACAACAAGTACTTCAACCAAGTGAGCAACAATGACAGCATCCAAAAAGTGACCATCAACAGAGTCTCTCCCCTGCTCAACATGGacacagaacacaagcacaaacacaatccagaacaAGGTGACATCACAAAGTCCACAAGGTCATTCTCCTATTCTGCTTCATCATCACTTGGTGTTGGTGGTGGTAACCGCAACAACATGATCATGATGAACAACCACAAAGCTCATTCATTCCATGCTGCAACTTCAACACCACCACCACCTTCATCTTCCAAGTCCACTTTGAACAACAAAGCTGGTTTGTTATTCCACCACCCTCAAAAACCAACCACAATCTCAGCTACTAAACCTCCTCATCAAACATCCTCCAATCTTACAAAGAAACTCAGAACCTCCTTGTCAAAACCCATTTGGCTTTTGAGAAGAAAATGCCCTTGCAATGATAGAAAGTCAGTGCaagtcaaaggaaacacaaatacaaacacaaacaaaaacaccccaaaagccaaaactccaacaaccccacaaccccaaaccctctcacacaaacaTTCCTTGAATCACAAAACAAAATCCAACAAAGAAGTGAAGTCTCAAAGTCAAAGGTTGTTCCAATTCCAATCTGCCATGAACCAAGCTAGAAGGCCCACAAGTGAAGGCTTCACTTTCCCTTTGTTCTTGGCAAGTAACTCCAACAACCCCACAAAGCCTCATCATCAGGTTCTTCTCAACGTGGTGCATGAAGAAGAGGACACAACCCCACGTGAGTCCTTGCACGTGTTCCAACCTCCAAGCCCCCCCAAGTCACGTGCCATGGATGATGATGCAGCTAGTGATGCAAGTTCTGATCTTTTTGAGATAGAGAGCTTCTCCACTCAAACTACTACATACCCCATTATCACACCCTCATCAATTTCACAGTGCCATCAAACCACCGATCATGAGTTCTTCTTcgccgccgacgccggcagcagcggggcggcggcggctgcTGAGGGATATTGA 1161 0.3704 MEKSNLNPKSPTKDRNAYFSSPHLTHDQPNKFEPHHSGLRALDHEVNDFDAYNKYFNQVSNNDSIQKVTINRVSPLLNMDTEHKHKHNPEQGDITKSTRSFSYSASSSLGVGGGNRNNMIMMNNHKAHSFHAATSTPPPPSSSKSTLNNKAGLLFHHPQKPTTISATKPPHQTSSNLTKKLRTSLSKPIWLLRRKCPCNDRKSVQVKGNTNTNTNKNTPKAKTPTTPQPQTLSHKHSLNHKTKSNKEVKSQSQRLFQFQSAMNQARRPTSEGFTFPLFLASNSNNPTKPHHQVLLNVVHEEEDTTPRESLHVFQPPSPPKSRAMDDDAASDASSDLFEIESFSTQTTTYPIITPSSISQCHQTTDHEFFFAADAGSSGAAAAAEGY 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01154 386 MobiDBLite consensus disorder prediction 203 235 - -
Cca08g01154 386 MobiDBLite consensus disorder prediction 1 36 - -
Cca08g01154 386 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED 25 377 IPR039615 GO:0009638
Cca08g01154 386 PANTHER - 25 377 - -
Cca08g01154 386 MobiDBLite consensus disorder prediction 301 331 - -
Cca08g01154 386 MobiDBLite consensus disorder prediction 1 27 - -
Cca08g01154 386 MobiDBLite consensus disorder prediction 160 179 - -
Cca08g01154 386 MobiDBLite consensus disorder prediction 201 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01154 Cca-Chr8 32730516 32731991 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01154 - - gsj:114399918 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00538 07 7676922 7678469 Cca08g01154 08 32730516 32731991 PCT