LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca08g01059	ATGAGAGCATACGGTGGAGGAAAGAGGAGGCGAGTGGCAGTGCAACCATTTCTCGTTTTGTGTGCATTGGTGACTGGTTTGGGGCTCTTGATGCTCGCGCTCAGGCCCTTGGATGCAACCACTCCTGGCCCTCTCGAGAGAGCTTCCCAGGACTTTAACACTTCCATCATCAATGGCTCCAGTGCGGAAGCCGTGGCCTCTCGGCGCGTCAAACTGAAGGCCTGCGCCACTGTGGAAGAAATGGGGAAGGATTTCAGAAGAGGTGTTGCCAAGGAGTCCCTCAGAGTCAGAACCGTTATCCATAACCATTTTCTTAACAATGGTGCTTCAAGAGTCAGGGATTTGCCCCCAGATCAGTTCTGTAGACATGGCTTTGTTCTCGGGAAGACAGCCGAGGCAGGTTTTGGTAACGAAATGTACAAGGTCTTAACTGCCGCAGCACTTAGTGTGATGCTAAACCGGTCCTTGATCATTGGTCAAACCAGGCACATTGGAAAATATCCTTTTGGAGACTACATTTCTTACTCCAACTTTACTTTTACGATGAAAGAAATCAAGCATTTGTGGAGAAACAAAGGTTGTGAAAGCAAATATGGGAGGAAACTGGTTATGAGAATTGATGATTTTGAGAAACCAACAGAAACAAATGTTCTTTGTAGCAATTGGAAGAAATGGAAGCAACCTATCATATGGTTTCAAGGAACTACTGATTCTGTGGCAGCACAATTTTTCTTAAAGAATATACACTCCCAGATGAGGATTGCTGCTCTTGCTTTATTTGGTGACCCGCAAGTTCTAGGTTTACGACCCAATGTTTTTGGGGAGCTCATGAGGGTCCTCATATCCCCTTCAGAAGATGTTAAGGCAGCTGTCAATTGGGTTATTGGTGCTGGGGAGAATCCTGACATCTCATTGCATATGCGGATGCTTATGAATAGGTCTGCAAGAGCTGTGCAAGCAGTGTTGCGTTGCCTGAGAAAAGCCATGCAGAGTCAACACCTACTGTCATCGAGACCAAAGGTGGTTCTGGTGTCAGATACACCTGCTGTTGTTAAAAGTATCAAATCTAACATAAGTGAATTTGCAGAGGTTCTTCATTTTGATTATGAAAAATTCAAAGGAAGTATGTTTAAAGGATTTCGCAGTTCAGATTTTAGAAGGAAGGATTGGGGTACCGCGCCTAGATGGGTTGCTTTTGTAGATTTTTTTCTCGCTTCTCGTGCAAAACATGCCGCAGTTTCTGGAGCTCACCGTCGTGTCGGGACTACATATGCTCAATTAATTGCTGCACTGGCAGCAGCCTATAATCTGGGGGACAAGTCTGGTTCAAGGTTTATGTTCCTTAGCAGTTTCCAGAGCAATTTGTTGAGTGATGGCTTAAAGAATCAGATTGGTTGGGGCCATGTGTGGAACAGATATGCTGGTCCATTGAGTTGTCACAACCAGGCCAACCAATGTGCCTTCACACCACTTCTTCCTTCTGCATGGTGGGATGGTCTTTGGCAGTCTCCAATTCCAAGGGATATTAACCGTCTTGCTTCCTATGGCATCCGGCTATCTGGTCTTGGCACTGTTGATAACGATTCCCTTAATAGCCACTGGCAACTCCTCCGTCTGGATTCTTTGAGATTTCTGTCTCTTAGCACAGGGCTACTTTTCTCCGTCAACCGCATTCACACCATGAGCATCAACCATCAATTATAA	1704	0.4554	MRAYGGGKRRRVAVQPFLVLCALVTGLGLLMLALRPLDATTPGPLERASQDFNTSIINGSSAEAVASRRVKLKACATVEEMGKDFRRGVAKESLRVRTVIHNHFLNNGASRVRDLPPDQFCRHGFVLGKTAEAGFGNEMYKVLTAAALSVMLNRSLIIGQTRHIGKYPFGDYISYSNFTFTMKEIKHLWRNKGCESKYGRKLVMRIDDFEKPTETNVLCSNWKKWKQPIIWFQGTTDSVAAQFFLKNIHSQMRIAALALFGDPQVLGLRPNVFGELMRVLISPSEDVKAAVNWVIGAGENPDISLHMRMLMNRSARAVQAVLRCLRKAMQSQHLLSSRPKVVLVSDTPAVVKSIKSNISEFAEVLHFDYEKFKGSMFKGFRSSDFRRKDWGTAPRWVAFVDFFLASRAKHAAVSGAHRRVGTTYAQLIAALAAAYNLGDKSGSRFMFLSSFQSNLLSDGLKNQIGWGHVWNRYAGPLSCHNQANQCAFTPLLPSAWWDGLWQSPIPRDINRLASYGIRLSGLGTVDNDSLNSHWQLLRLDSLRFLSLSTGLLFSVNRIHTMSINHQL	567

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca08g01059	567	PANTHER	EXPRESSED PROTEIN	5	535	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca08g01059	Cca-Chr8	27361437	27369128	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca08g01059	-		-	gmx:100775912	846.654

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca07g00788	07	12628508	12633888	Cca08g01059	08	27361437	27369128	PCT