Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00788 ATGAGATATGGCGGAGGTAGAAAGAGGCGAATGCTGTTGCAACCGTTTCTGGTTCTTTGTGCGTCGGTGACTGGTTTGGGGCTGTTGATGCTGGCGCTGAGGCCGTTGGATCCTCCAATCACCGTCGATTTCCCGAGGGATTTCGAGTTCGGAGTTTCAAACGATTCGAGATTGGATGGCGGCGGCGGCGACAGCTCAGGCATCGTCGGAGAGAAACCGTGCGCGGCGGTGGAAGAGATGGGGAAGGATTTCGAGACAGGTGTTTCTGGGAAGGAAACACTGAGAGTGAGGAGAATTATCGAGGATCACTTCGTTCTGAACGGTGCTTCGAGAATCAGGAATTTGCCTCCGGAGCAGTTCTGTAGTCATGGATTTGTTCTGGGAAAGACTGCCGAGGCAGGTTTTGGGAATGAAATGTACAAGGTCCTAACTGCTGCGGCACTGAGTTTAATGTTAAACCGGTCCTTGATCATTGGCCAAACCAGGCATATTGGCAAATATCCTTTTGGGGATTACATTTCTTATTCCAACTTTACCTTTACCTTGAATGAAATAAAGCATCTGTGGAGACAAAATGGTTGTGAAAGCAAATATGGGAGGCAACTGATTATGAGGACTGATGATTTTGAAAAGCCAGCTCAAACAAATGTTCTCTGTAGCAATTGGAAGGAATGGAAGCAACCTATCATATGGTTTCAAGGAGCTAATGATGCTGTGGCAGCTCAATTTTTCTTGAAAAACATACACTCTCAGATGAGAATTGCTGCTTTTGATTTATTTGGTGATCCTCAAGTTCTTGGATCTCAGCCAAATGTATTTGGAGAGCTCATGAGAGTTCTCATATCCCCATCAAAAGATGTTGAGGCAGCTGTCAATTGGGTTATTGGTGGTGGGGAGAATCCTGACATTTCATTGCATATGCGGATGCTTATGAATAGGTCCATACGAGCTGTACAAGCTGCATTGCATTGCATCAAAAAAGCCATACAGAGTCGGCACCTAATGTCAAGACCAAAGGTGGTTGTGGTATCAGATACACCTTCTCTTGTTAAAAGTATCATGCTCAACATAAGCGAATTTGCGGAGGTGGTTTATTTTGATTATGAAAAGTTCAAAGGAAATATCTTTGAAGGTTTGCCCAAGTCAGATTTTAGAGTGAAGGATTGGGGTCCAGCACCCAGGTGGGTTGCTTTTGTGGATTTTTTTCTTGCATCTCACGCTAAATATGCTGTTGTCTCTGGAGCTCATCGCCGCGTTGGAACTACCTATGCTCAATTAATCGCTGCCCTGGCTGCAACACGTAATCTAGGAAACAACTCGTCAGGTTCAAGTTTTTCATTTTTTAGCAGTTTCCAGAGTAATATGTTGACTGAAGGTTTAAGGAATCAAATTGGTTGGGGCCATGTGTGGAACAGATATGCTGGACCGTTGAGTTGCCCTAACCAGACCAATCAATGTGCTTTCACACCTCTTCTCCCTCCTGGTTGGTGGGATGGCCTATGGCAGTCTCCTATTCCAAAGGATATTAATCGCCTTGCTGCCTATGGCATCAAACTTTCTGGTCTTGGCACAGTTGATCACGATTCCCTTCAAAATTACTGTAATTCAAGGAAAAATGTTGAGAGAACCGTCACATTCAATTTGTAG 1647 0.4457 MRYGGGRKRRMLLQPFLVLCASVTGLGLLMLALRPLDPPITVDFPRDFEFGVSNDSRLDGGGGDSSGIVGEKPCAAVEEMGKDFETGVSGKETLRVRRIIEDHFVLNGASRIRNLPPEQFCSHGFVLGKTAEAGFGNEMYKVLTAAALSLMLNRSLIIGQTRHIGKYPFGDYISYSNFTFTLNEIKHLWRQNGCESKYGRQLIMRTDDFEKPAQTNVLCSNWKEWKQPIIWFQGANDAVAAQFFLKNIHSQMRIAAFDLFGDPQVLGSQPNVFGELMRVLISPSKDVEAAVNWVIGGGENPDISLHMRMLMNRSIRAVQAALHCIKKAIQSRHLMSRPKVVVVSDTPSLVKSIMLNISEFAEVVYFDYEKFKGNIFEGLPKSDFRVKDWGPAPRWVAFVDFFLASHAKYAVVSGAHRRVGTTYAQLIAALAATRNLGNNSSGSSFSFFSSFQSNMLTEGLRNQIGWGHVWNRYAGPLSCPNQTNQCAFTPLLPPGWWDGLWQSPIPKDINRLAAYGIKLSGLGTVDHDSLQNYCNSRKNVERTVTFNL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00788 548 PANTHER EXPRESSED PROTEIN 7 546 - -
Cca07g00788 548 PANTHER EXPRESSED PROTEIN 7 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00788 Cca-Chr7 12628508 12633888 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00788 - - gmx:100807268 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00788 07 12628508 12633888 Cca07g00788 07 12628508 12633888 ECH
Cca07g00788 07 12628508 12633888 Cca08g01059 08 27361437 27369128 PCT