Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00985 ATGGGGAGGAGTTTGAGTCCAATGCTACAAAGAGAGATAAAAAATCTTGACAAAGATTCTGATAGCCGCAAATCTGCAATGAGGGCATTGAAGTCATATGTGAAAGATTTGGACATGAAGACAATTCCTATCTTTCTTGCGCAAGTTTCTGAGACCAAGGAATCTGGTTCCTTGTCTGGAGAATTTACAATTTCACTGTATGAGGTTCTTGCTCGGGTTCACGGAGTCAAAATTGTTCCCATGATAGACAGCATTATGCAATCCATAGTTCAGACCTTGGCTTCAAGTGCAGGGTCTTTCCCTTTCCAGCAGGCTTGCTCAAAGGTGGTTCCAGCCATAGCAAGGTATGGAATTGACCCCACAACTCCAGAAGAGAAGAAAAGACATATAATTCACTCTCTTTGTAAGCCACTTTCAGATTCTCTCTCCAGTTCTCAAGAGAGTTTGACATGTGGCGCGGCCCTTTGCTTGAAGGCTCTTGTGGATTCAGATAACTGGCGTTTTGCTTCGGATGAGATGGTTAATAGGGTTTGCCAAAATGTTGCTGTGGCATTAGAGGGGAAGTCTACTCAAACCAATTCACACATGGGTTTGGTAATGACCCTGGCAAAGCGCAATGCTTTGATTGTTGAAGCTTATGCTAGATTGCTCATACAATCTGGATTGCGAATACTAAATGGTGAACCTTTGGAGGGAAATTCTCAGAAGCTATTTGTAGCCATTCAAATGGTGAACTTTTTGATGAAATGTTTAGATCCCCGAAGCATATTTTCGGAGGTTGAACAGATAATTGAGGTGATGGATATGTGTCAATCAGACAAAATGGCTTATGTCAAAGGAGCTGCATTTGAAGCTTTGCAGACTGCTAAGATAATTGCCACTGATAAAAAATCAAGATGTGTGAAGAGTCCTGCTTCTGTAACAGGATCAAATTTCAGTAGGAAAGACTACATGGAAGGAGAAAGTTTTTCTGGTGATGGAGATCGTTCTCCTACATCTACTTCTCCAGAATCACGTTCCTTGGACTTCTTCCATGGATATGGATCCTCTATTGAGTCTTCCATTTCAACAAGTCTGCCTTCTCAGAACTTCTATGAACGAAGGAGTGTGAATAGGAAGCTTTGGAGTCATGAAAATGGAGGGGTTGATGTGTCTCTCAAGGATGGTCTATTCTCCAAGTCACAGCATGGAAATTCCTTGTTGGACCACACTATGGATCATGAATTTTCTAATGGAGGGGGAGACTTAACAAGAGAGTTTGCTGGTTTCATGCACAAAAGTCCTTGGCATGGAGTATCCAGAAGTGCCAGCACAAGTCCCCTGAGATCACGCACTCAGGTTAATGTTGACAACATGAAACTCTTCATAACTCCTAGGAAGCTCATTCACTCTCTTCAAGACCCAAATGATGAGATTTCAGATTGCTCTGAGAAACCAAATAGAAGGATCAAGAGTCTATCATCAGGCAATGTTAAGTGGAGCCCAGCAACATATTCTAAATATGATCAAAATGGTATTGCAGAACATGTCAACTATGATTCTAAAGAGAATGGAAGCTTATATGGTGAAGATCAGTTCCAAGGTGGACCGGAGTCAGTCTCATCAACGGACGACTTGCTTGCTAATAATGATTTGCCAAGTCCTTCTGAGGATGTTCTTGAAAGCAGAAATGGTACTCAAACAGTTCTCATTGGAAAGCCCTTTCGAAAGACTAAACATAAATTAGTTTGTGGCCTTTCTTTTGCTCTTCTGGCAATAGCTGCTCCTTTACTATGGATCAATAGTCAGGAAGAAGGCCATTTTCTTGTCCCGACATAA 1818 0.4164 MGRSLSPMLQREIKNLDKDSDSRKSAMRALKSYVKDLDMKTIPIFLAQVSETKESGSLSGEFTISLYEVLARVHGVKIVPMIDSIMQSIVQTLASSAGSFPFQQACSKVVPAIARYGIDPTTPEEKKRHIIHSLCKPLSDSLSSSQESLTCGAALCLKALVDSDNWRFASDEMVNRVCQNVAVALEGKSTQTNSHMGLVMTLAKRNALIVEAYARLLIQSGLRILNGEPLEGNSQKLFVAIQMVNFLMKCLDPRSIFSEVEQIIEVMDMCQSDKMAYVKGAAFEALQTAKIIATDKKSRCVKSPASVTGSNFSRKDYMEGESFSGDGDRSPTSTSPESRSLDFFHGYGSSIESSISTSLPSQNFYERRSVNRKLWSHENGGVDVSLKDGLFSKSQHGNSLLDHTMDHEFSNGGGDLTREFAGFMHKSPWHGVSRSASTSPLRSRTQVNVDNMKLFITPRKLIHSLQDPNDEISDCSEKPNRRIKSLSSGNVKWSPATYSKYDQNGIAEHVNYDSKENGSLYGEDQFQGGPESVSSTDDLLANNDLPSPSEDVLESRNGTQTVLIGKPFRKTKHKLVCGLSFALLAIAAPLLWINSQEEGHFLVPT 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00985 605 MobiDBLite consensus disorder prediction 517 553 - -
Cca08g00985 605 MobiDBLite consensus disorder prediction 466 481 - -
Cca08g00985 605 PANTHER PROTEIN SINE1 1 605 - -
Cca08g00985 605 MobiDBLite consensus disorder prediction 466 487 - -
Cca08g00985 605 MobiDBLite consensus disorder prediction 528 553 - -
Cca08g00985 605 Gene3D - 3 301 IPR011989 -
Cca08g00985 605 SUPERFAMILY ARM repeat 16 288 IPR016024 -
Cca08g00985 605 PANTHER GEMIN2 1 605 - -
Cca08g00985 605 MobiDBLite consensus disorder prediction 318 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00985 Cca-Chr8 23653516 23657102 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00985 - - gmx:100820627 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00668 07 9691767 9695169 Cca08g00985 08 23653516 23657102 PCT