Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00668 ATGGGAAGGAGTCTCAGCCCTTTGGTGAGGCAAGAGCTGGCAAATCTTGACAAAGATGAAGATAGTCGCAAATCTGCCATGAAAGCATTGAAGTCCTATGTGAAAGATTTGGATTTCAAGGCCATTCCTGTTTTTCTTGCAAAAGTGTCTGAGAGCAAGGAAAATTGTTCTGGGGAATTCACAATTTCAATCTATGAAGTTCTTGCGCGGGTTCATGGTGTCAAAATTGTTCCTTTGATAGACAGCATCATGGGAACCATAGTCAGGACTCTGGCTTCAAGCGCAGGGTCTTTCCCTCTTCAACAGGCTTGCTCAAAGGTGGTTCCTGCAATTGCAAGACATGGAATTGACCCCTTAACCCCAGAAGATAAAAAGAGGGATATAATTCGGTCCCTTTGCATGCCTCTTTCAAATTCTCTCTCAAGTTCTCAAGAGAGTCTTACTTCTGGTGCTGCCCTTTGCTTGAAGGCTTTGGTGGATTCAGATAACTGGAGATTTGCTTCTGATGAATTGGTTAATAGGGTTTGCCAGAATATTGCAGTGGCATTAGATGGAAAGTCTGGTCAAACCAACTCACACATAGGTCTGGTTATGTCGCTGGCCAAGCGCAATGCTTTGATCATTGAAGCATATGCAAGGTTGCTCATACAATCTGGACTAAGAATACTGAATGCTGGCCTTGTGGAGGGGAATTCTCAGAAGCGGCTTTCTTCCATTCAGATGATCAACTTCTTGATGAAAAGTTTGGACTCTAGGAGCATATTCTCAGAGCTTGAATTGATAATTGAGGAGATGGACAAGTGTCAATCTGATAAAATGGCATTTGTTCAAGGTGCAGCACTTGAGGCTTTGCAAACTGCCAAGAGAATTGTTAGTGACAAAAAGCCTAGATATGCAAAAAGTCCTGCATCGGTGACAGGGTCAAATTTTAGTAGGAGAGATGGAGACTTTATGGAGGGAGAGAATAGTTCTGGTGATGGAGACCGCACTCCTAGTTCTCTTTCACCAGAATCACGTACTTTGGACTTTTTCCCTGGATATGAATCCGTTGTTGAGTCTCCTATTTCAAGCAACTTAGACTATGAACGAAGAAGTGTGACTAGGAAGCTTTGGAGTAATGAAAATGGAGGGGTCGATGTGTCTCTCAAGGATGGTTTGTTTTCAGAAGTAGGAAAAGCAAGTGCTTTGTTGGAAAATTCATTGATTCACGAGTTTTCTGATGGTCAGGGAGATTCTACAGAGGAGTTTGCTGGTTTCATGGCCAGAAATCCCAGGCATGTAGTATCCAGAAGTACTACCACAAGTCCACTGAGGTTACGCTCAAAGGCAAATGTTGACAGCATAAAAATATTTAACACCCCTAGGAAGCTCATTCACTCTCTTCAAGATTCAAGTGATGTGACTTTGGGTTGCTCTGAGAAACAGAATAGAAGGTTCAGGAGTCTATCCTCAGGTAATATTGAATGGAGTGCAACTTCTAAATATGACCAAAACGGTTTCTCAGATCATGTGAAGTGTGATAGTGAGGTGAATGAAAGTTTATGTGCTGAGGTTGAGTTCCAAGATGGCTCAGAATCAGTCTCATCAACAGATGACCTTCCTGTAGACACCAATATGCCTACCAAAGTGGTTCCTGAAAATAGAAATGTTACACCAACTGCACTACCAAAGATTAAATATAAATTGGTTTGTGGTCTTTCATTTGTTCTGCTTGCATTGGCAACTCCTTTACTTTGGATCAATAGTCAGGATGACGGCCATTATCTTGTCCCAACATAA 1779 0.4205 MGRSLSPLVRQELANLDKDEDSRKSAMKALKSYVKDLDFKAIPVFLAKVSESKENCSGEFTISIYEVLARVHGVKIVPLIDSIMGTIVRTLASSAGSFPLQQACSKVVPAIARHGIDPLTPEDKKRDIIRSLCMPLSNSLSSSQESLTSGAALCLKALVDSDNWRFASDELVNRVCQNIAVALDGKSGQTNSHIGLVMSLAKRNALIIEAYARLLIQSGLRILNAGLVEGNSQKRLSSIQMINFLMKSLDSRSIFSELELIIEEMDKCQSDKMAFVQGAALEALQTAKRIVSDKKPRYAKSPASVTGSNFSRRDGDFMEGENSSGDGDRTPSSLSPESRTLDFFPGYESVVESPISSNLDYERRSVTRKLWSNENGGVDVSLKDGLFSEVGKASALLENSLIHEFSDGQGDSTEEFAGFMARNPRHVVSRSTTTSPLRLRSKANVDSIKIFNTPRKLIHSLQDSSDVTLGCSEKQNRRFRSLSSGNIEWSATSKYDQNGFSDHVKCDSEVNESLCAEVEFQDGSESVSSTDDLPVDTNMPTKVVPENRNVTPTALPKIKYKLVCGLSFVLLALATPLLWINSQDDGHYLVPT 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00668 592 MobiDBLite consensus disorder prediction 525 545 - -
Cca07g00668 592 Gene3D - 5 314 IPR011989 -
Cca07g00668 592 PANTHER PROTEIN SINE1 1 592 - -
Cca07g00668 592 PANTHER GEMIN2 1 592 - -
Cca07g00668 592 MobiDBLite consensus disorder prediction 298 338 - -
Cca07g00668 592 SUPERFAMILY ARM repeat 14 294 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00668 Cca-Chr7 9691767 9695169 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00668 - - gmx:102659858 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00668 07 9691767 9695169 Cca08g00985 08 23653516 23657102 PCT