Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00970 ATGGctgcttcgtttcttcttcttttttctctcctttgcgtggttatgcttcaattcgcgtctgcgttttcttcttcttcctcctcttTGTGCCTTCCGGAGCCGCTTTCGTTTCGCTTCAATCTCCAATCGCAGTGCCCAATCTCGATCCCGTCGAATCCGCCTCTTCAGGTGGATGGAAAATTTGTAGAAGGAATTCTGTCTGGCAGAAACAAGATAGAGTATATTTCTATACTCTTCTATGCTTCTTGGTGCCCATTTTCTCGCGAAATGCTTCCTCAATTTGAAATTCTCAGTTCCATGTTTCCTCAAGTAGAACATTTTGTTCTTGAGCAATCATCAGCTTTGCCCAGCTTGTTTTCAAAATATGGAATCCATAGCTTGCCTGCAATATTACTAGTAAACCAGACATCAAGGTTGAGATATCATGGTCCAAACAATCTTCTCTCTCTTTCAGAATTTTATGAGAGGAACACAAGATTTGAAGCAATTAGTGATATTGTTGGTCAACCAAGCAACATAATGAGTGATGAGAATTCAACTACAAACCTGTTTGGTCTGTCTCTGAAAGAAACATGGAGCAGGGAACCCTACTTGTTATTCTCTGTATTGTTTCTCTGCTTGAGGTTACTTCTTTTTGTATTCCCGAAGATCATATCGCGTCTTCGAGCATTCTGGGCTTCCAGCATTCCTCATCTGAACATACAAATATTTGGTGAGACGAGCCAAGTGATGGGACGTGTGCTTCAGGTGATCGATGTCAGAAGGGTTTGGACTAAGCTAAGACTCTGCAAGACGAGGTATTTTCATGAAAGGGCAAGGAGTGCCGGCGTTTGGGCTTCATCTCTGGCTTCAGTTTCTTTGGGTGAGTCATCATCAGCTAGGTCATCAGCCCAAGGTTTGAACTAA 909 0.3872 MAASFLLLFSLLCVVMLQFASAFSSSSSSLCLPEPLSFRFNLQSQCPISIPSNPPLQVDGKFVEGILSGRNKIEYISILFYASWCPFSREMLPQFEILSSMFPQVEHFVLEQSSALPSLFSKYGIHSLPAILLVNQTSRLRYHGPNNLLSLSEFYERNTRFEAISDIVGQPSNIMSDENSTTNLFGLSLKETWSREPYLLFSVLFLCLRLLLFVFPKIISRLRAFWASSIPHLNIQIFGETSQVMGRVLQVIDVRRVWTKLRLCKTRYFHERARSAGVWASSLASVSLGESSSARSSAQGLN 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00970 302 Gene3D Glutaredoxin 55 165 - -
Cca08g00970 302 SUPERFAMILY Thioredoxin-like 48 155 IPR036249 -
Cca08g00970 302 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 5 297 - -
Cca08g00970 302 Pfam Thioredoxin 76 154 IPR013766 -
Cca08g00970 302 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 5 297 IPR044794 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00970 Cca-Chr8 23181354 23191938 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00970 - - aprc:113867833 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00649 07 9439017 9443025 Cca08g00970 08 23181354 23191938 PCT