Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00649 ATGGCCACTTCGcttcttcttcttcttcttcttctcttcatcacctttttgtcttttctaccatcctctccttctgctacctttctCTATGATCTTCAATCTCAGTGCTCCCTCGCCATCTCCCCTCACCCTCCTCTTCAGGTTCCCGACTCTATCTCTGTCCCTTCAAAATTTTCATTCTTTACGTGGGTTTTATCTGGAAAAGAGAGGGTTGAATACGTTTCTATACTCTTCTATGCTTCCTGGTGTCCTTTCTCATGCAGAATACTTCCTGAATTTGAGATTCTTAGTTCCATGTTTCCTCAAGTAGAACATGCCGCACTTGAGCAATCATCTGGTTTGCCAAGCTTATATACAAAATATGGAATCCATAGCATACCTGCAATCATACTGGTGAACCAGACATCTAGGGTGAGATATCACGGTCAAAACAATCTTAATGCCCTTGTACAATTTTATGAGAGAAACACTGGATTAGAAGCAAGGGACTATGTTGTTGTTGGTCAACTAAGCAACTTGATGAGTGATGAACATTCAACTATGAAGGGCCTCTCCCTCCAAGAAATATTAATCAGAGAACCTTACTTGACATTATCTATATTCTTTCTCTGCTTGAGGATTGTTCTCTTTGTATTTCCCGCGATTAAGTCAGAGGATTTGGACCAAGTTAGGACAATGCAAGACCAGGAACTTTCATCACAGGGCGAGGAGTATCAGGGTTTGGGTATCATCTTTGTCTTCTGTTTCTCTGGGAGACTCATCAGCTAG 768 0.3776 MATSLLLLLLLLFITFLSFLPSSPSATFLYDLQSQCSLAISPHPPLQVPDSISVPSKFSFFTWVLSGKERVEYVSILFYASWCPFSCRILPEFEILSSMFPQVEHAALEQSSGLPSLYTKYGIHSIPAIILVNQTSRVRYHGQNNLNALVQFYERNTGLEARDYVVVGQLSNLMSDEHSTMKGLSLQEILIREPYLTLSIFFLCLRIVLFVFPAIKSEDLDQVRTMQDQELSSQGEEYQGLGIIFVFCFSGRLIS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00649 255 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 8 218 IPR044794 -
Cca07g00649 255 Gene3D Glutaredoxin 56 164 - -
Cca07g00649 255 Pfam Thioredoxin 73 153 IPR013766 -
Cca07g00649 255 SUPERFAMILY Thioredoxin-like 59 156 IPR036249 -
Cca07g00649 255 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 8 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00649 Cca-Chr7 9439017 9443025 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00649 - - gmx:100785551 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00649 07 9439017 9443025 Cca08g00970 08 23181354 23191938 PCT