Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00753 ATGGAAAACAACATAAACATTGAAATTGCAGAACAAGGCTCTCCTGAAGTTCCATCACTCATTAAGTATATATCATCAAGTGAAGTTGCTGGCTTTGATACTTCTGACTCTCAATTTCTCAGCCCATCTGCCAAAGGAAGTGAAGCAACCTCACCAGAAAGACAACATGATGAACCTGAAGTCATCAATCATCAAAGGAAGTATTCTATCAGCATGCCACTTTCTTCTGAAGAAGTTCAGCTTCAACCACTGGACACCAAAACATATAGTATTCCAAATTCCTCCTCTCAATCAGGAACTGCTAGCTCCAACCATCCACAGCCATCAAAATGTTACTCTCAACCAATGCCAAAAGGCCATGTGCCCCAAGAGGCAGAAGATGGAGTCAAAACAAACAACCATCCTGGCATCAAAGCATTCAAGGACAAAAGGTTTGACTCTTTTAAAACATGGTCTGGGAGACTTGAGAGACAATTGTCAATTCTACGAGGAAAGTCACCCAGAGCCAGAGAAACTCCACAAGATGGTAACAACGACAACTCCAGGAGCACTGATAGGGCTTTACCAGTTGATCGGTATTTTGATGCATTGGAAGGTCCAGAGTTAGAAACTCTCAGGGCTTCAGAAGAGACAGTGCTTCCTCAGGACAGGCAATGGCCATTCCTTCTTCGGTTTCCAATTTCATCTTTTGGTATCTGCCTTGGAGTTAGCAGCCAAGCAATTCTTTGGAAAGCACTTGCCACATCCCCTTCCACTCAGTTCCTCCACATAAGCCTCAAAATCAACCTCATCTTATGGTTCATATCCATTGCTCTAGTTGCCACAGTTTCCACCATCTATCTCCTCAAACTCATTCTCTACTTTGAAGCAGTTCGTCGTGAGTACTACCATCCAATCCGTGTCAACTTCTTCTTTGCACCATGGATAGCACTCTTGTTCTTGGCCCTTGGTGTTCCCCCCTCAGTGACCAAACACTTGCACCATGCACTGTGGTACATTCTAATGTTACCAATATTCTGTCTTGAACTTAAGATCTATGGACAGTGGATGTCTGGAGGCCAAAGGAGGCTCTCAAAGGTGGCCAATCCTTCAAACCATTTGTCAATTGTTGGAAACTTTGTGGGGGCCTTGCTTGGGGCCTCTATGGGCCTAAAGGAAGGGCCCATTTTCTTCTTTGCAGTTGGGCTGGCCCACTACACTGTCATGTTTGTGACTCTCTATCAGAGACTTCCAACAAATGAGACACTCCCAAAAGAGCTTCATCCTGTGTTCTTTCTGTTTGTTGCAGCACCTAGTGTTGCTTCCATGGCTTGGGCCAATATTCAGGGCTCTTTTGACTATGGATCAAGGATTGCCTATTTCATTGCCCTCTTCCTTTATTTCTCATTGGCCGTTCGGATTAATTTTTTCAGAGGATTCACATTCTCTCTTGCATGGTGGGCCTATACTTTTCCAATGACTGGTGCAGCAATTGCAACCGTAAGATACTCAAATCAGGTCACAAACGCAGTTACTAAGACACTGTGTGTTATACTCAGTCTCATCTCCACATTCATAGTAATAGCACTGCTTGTATCAACCATATTGCATGCCTTTGTCTTCAAAAACCTCTTCCCCAATGACCTTGCCATTGCCATAAGTGACAGAAAGAGAAGGCCACAAAAGAAGTGGCTTGGTCTTAGATACAGGAGCCATGACTCCAAAGAGATTGAAAATTACTTGAAGTTTGTGAACTCGGATAAAATCGATTTAGAAGCTTCTACCCCACTACCAAATAGCACACAGAACTTGCCATCAATCTGA 1803 0.4365 MENNINIEIAEQGSPEVPSLIKYISSSEVAGFDTSDSQFLSPSAKGSEATSPERQHDEPEVINHQRKYSISMPLSSEEVQLQPLDTKTYSIPNSSSQSGTASSNHPQPSKCYSQPMPKGHVPQEAEDGVKTNNHPGIKAFKDKRFDSFKTWSGRLERQLSILRGKSPRARETPQDGNNDNSRSTDRALPVDRYFDALEGPELETLRASEETVLPQDRQWPFLLRFPISSFGICLGVSSQAILWKALATSPSTQFLHISLKINLILWFISIALVATVSTIYLLKLILYFEAVRREYYHPIRVNFFFAPWIALLFLALGVPPSVTKHLHHALWYILMLPIFCLELKIYGQWMSGGQRRLSKVANPSNHLSIVGNFVGALLGASMGLKEGPIFFFAVGLAHYTVMFVTLYQRLPTNETLPKELHPVFFLFVAAPSVASMAWANIQGSFDYGSRIAYFIALFLYFSLAVRINFFRGFTFSLAWWAYTFPMTGAAIATVRYSNQVTNAVTKTLCVILSLISTFIVIALLVSTILHAFVFKNLFPNDLAIAISDRKRRPQKKWLGLRYRSHDSKEIENYLKFVNSDKIDLEASTPLPNSTQNLPSI 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00753 600 MobiDBLite consensus disorder prediction 31 49 - -
Cca08g00753 600 PANTHER - 9 573 IPR030183 GO:0006873|GO:0008308|GO:0016021
Cca08g00753 600 MobiDBLite consensus disorder prediction 68 111 - -
Cca08g00753 600 Pfam Voltage-dependent anion channel 225 528 IPR004695 GO:0016021|GO:0055085
Cca08g00753 600 MobiDBLite consensus disorder prediction 160 185 - -
Cca08g00753 600 CDD TDT_SLAC1_like 224 527 - -
Cca08g00753 600 Gene3D - 221 538 IPR038665 -
Cca08g00753 600 MobiDBLite consensus disorder prediction 31 138 - -
Cca08g00753 600 MobiDBLite consensus disorder prediction 50 64 - -
Cca08g00753 600 PANTHER S-TYPE ANION CHANNEL SLAH2-LIKE ISOFORM X1 9 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00753 Cca-Chr8 14674010 14679915 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00753 - - gmx:100816885 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00753 08 14674010 14679915 Cca08g00753 08 14674010 14679915 ECH
Cca08g00753 08 14674010 14679915 Cca02g02201 02 42510735 42513912 PCT