Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00726 ATGAAGAAAGTGGTGCTAAAGGTGGAACTCTATGATGACAAAATCAAGAAAAAGGCCATGAAGGCAGTATCTGGTCTTTCGGGGGTTGAGTCAGTCTCTGTAGACATGAAGGACCAGAAAATGACTCTAATTGGGGACATTGATCCTGTTAGTGTGGTGGGCAAGCTTAGGAAATTGTGCCATTCAGATATAGTTTCAGTAGGACCAGCCAAAGAGGAGAAAAAGGAGGAACCCAAGAAAGAAGAGAAGAAGCCAGACAAGAAAGATCCAAAGGAGGAATATGCTGAACTTCTGTATGAAGCCTATAATAATCAGACTAGAATGCAGCAGCTATACCCTTATTACTATTACAGAACTGTGGAAGAGAATCCAAATGGCTGTGTTATCTGCTAA 393 0.4148 MKKVVLKVELYDDKIKKKAMKAVSGLSGVESVSVDMKDQKMTLIGDIDPVSVVGKLRKLCHSDIVSVGPAKEEKKEEPKKEEKKPDKKDPKEEYAELLYEAYNNQTRMQQLYPYYYYRTVEENPNGCVIC 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00726 130 MobiDBLite consensus disorder prediction 67 91 - -
Cca08g00726 130 Gene3D - 1 73 - -
Cca08g00726 130 SUPERFAMILY HMA, heavy metal-associated domain 1 60 IPR036163 GO:0046872
Cca08g00726 130 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 130 - -
Cca08g00726 130 Pfam Heavy-metal-associated domain 7 58 IPR006121 GO:0046872
Cca08g00726 130 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 130 - -
Cca08g00726 130 CDD HMA 21 59 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00726 Cca-Chr8 13726069 13727478 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00726 - - gmx:100306444 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00726 08 13726069 13727478 Cca08g00726 08 13726069 13727478 ECH
Cca02g02212 02 42641076 42642065 Cca08g00726 08 13726069 13727478 PCT