Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00725 ATGGAGTTGCATGATGATAGGATGAAGAAAAAAGCTATGAAGACAGCATCTGGCCTTTTAGGGGTTGAATCAGTTAGTGTTGACATGAAAGACAAGAAAATGACCCTATCGGGGGACGTTGACCCAGTGAGTGCAGTGTGCAAGCTACGAAAGTTGTGTCAGACAGAACTGGTTTCAGTTGAAACAGCAAAGGCAGAGAAAAAGAAGGTCGAAGCAACAGTGCCTGTTCCTCTAAAGCTCTATGAAGCCAATCCCCTTTATTATTATCGAATGGCACCACCACCTTATAGTCAAAATTACTATATTAGTAGTGTTGATGAGAATCCTAGTGGTTGTGTGATCTGCTAA 348 0.4195 MELHDDRMKKKAMKTASGLLGVESVSVDMKDKKMTLSGDVDPVSAVCKLRKLCQTELVSVETAKAEKKKVEATVPVPLKLYEANPLYYYRMAPPPYSQNYYISSVDENPSGCVIC 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00725 115 Gene3D - 1 66 - -
Cca08g00725 115 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 2 115 - -
Cca08g00725 115 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00725 Cca-Chr8 13689608 13690504 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00725 - - gmx:100800537 141.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00725 08 13689608 13690504 Cca08g00725 08 13689608 13690504 ECH
Cca08g00725 08 13689608 13690504 Cca02g02212 02 42641076 42642065 PCT