Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00712 ATGGAGTCTCAGAAGCTAATTATACATTTCATTCTTCTCCTTTTGATCCCTTGTTCTTCCTCTTTCATTCCCATAGATAACTACCTTCTCAACTGTGGGTCACAGAACAATGTTTCTCTCTTCAACCGCATCTTCATGAGTGATTCCACCAACCAAGGCTTAACCTTTCTCTCTGCTGACAAATCCATTTCCCTCACCAACCAAAACCCTCATCCAGATTTGCCTACTTTGTACCACACTGCAAGAGTTTTCCGCAGCACAGGAAGCTACAGGTTCAACCTGATGAAGAATGGTACCCACTTTGTTCGTTTTCATTTCTCACCCTTTAAGGCTCAAAGGTTTGATCTAAAATCTGCCATCTTCAGTGTCTTGGTTGATGGCAATTTGTTGCTGAGAAATTTCAAGCCAGATTATGGAGCTAAGTTGGTTGGCCCTTTTGGTGTGATGGAGTACAAGAACCTTTCATCTAAGGATGCTGCTAAGCCTGTGGTGAGCTCTCACACACCAAATTACCAGAAGGGAGGTGCGAGTCGAGAGATCGCACCTGATAATGTTTATATGACTGCTCAGGAAATGAACAAGGATCACTCCATTATAGCTTCACAATTCAACATAACCTGGGATTTTCCAGTGGCTCCGGGTGGTGTTCGACACTTGGTTCGGTTGCATTTCTGTGATATTTCTACGTGGATTTTGTGGCAGATTCTGATGATTCGGGTGTTATTCGAgccaactatagGTTCTGTATTGTGGAATTTGGAATATGCACTTCAGCTCCAAGAAAGTGAACAAGAAGGAGAGTCATATGATGATAGTGGTGCTCTGGAAACAGTGAATATGACAACTACAATAATTCCTGAGAGTCCTTCTAGCAACATAAGAAGAGAGGGAGATAATGATAATGGTTATTCAGACATGAGTGCTACCGAAGTTTTTTCTCAACTAATGAACACAGAAGGAAGATAG 966 0.4151 MESQKLIIHFILLLLIPCSSSFIPIDNYLLNCGSQNNVSLFNRIFMSDSTNQGLTFLSADKSISLTNQNPHPDLPTLYHTARVFRSTGSYRFNLMKNGTHFVRFHFSPFKAQRFDLKSAIFSVLVDGNLLLRNFKPDYGAKLVGPFGVMEYKNLSSKDAAKPVVSSHTPNYQKGGASREIAPDNVYMTAQEMNKDHSIIASQFNITWDFPVAPGGVRHLVRLHFCDISTWILWQILMIRVLFEPTIGSVLWNLEYALQLQESEQEGESYDDSGALETVNMTTTIIPESPSSNIRREGDNDNGYSDMSATEVFSQLMNTEGR 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00712 321 PANTHER OS07G0166700 PROTEIN 154 230 IPR045272 GO:0004714|GO:0006468
Cca08g00712 321 PANTHER OS07G0166700 PROTEIN 15 135 IPR045272 GO:0004714|GO:0006468
Cca08g00712 321 Pfam Malectin domain 29 135 IPR021720 -
Cca08g00712 321 Gene3D - 141 230 - -
Cca08g00712 321 Gene3D - 27 140 - -
Cca08g00712 321 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 154 230 - -
Cca08g00712 321 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00712 Cca-Chr8 13437976 13440477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00712 171 235 Glycosyltransferase AT4G00300 40.000 1.86e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00712 - - gmx:100787484 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00712 08 13437976 13440477 Cca02g02221 02 42727020 42729467 PCT