Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00699 ATGGAAGGCCGACACAGCACAGTGGAGACGGTGAAcgccgccgccaccgccatcgtcaccgccgatgccagagcccaacccaccgccGCGCCGAAAAAACGCTGGGGAGGCTGCTGGAGCCAGTATTGGTGTTTTGGATCTCATAAAAGCAGTAAAAGCAGCAAGCGAATTGGCCATGCTGTGCTTGTTCCAGAACCTGTTGCACCAACAGGTCCAGCTGCTCCTGCCGCACCAAATCCTTCAACTGCTATTGTAATGCCTTTCGTCGCCCCTCCATCTTCTCCGGCATCTTTTCTCCAATCTGATCCACCATCTGCTATTCAATCACCAGTTGGGTTACTTTCACTCTCTTCTCTTGCTGTCAATGCTTACTCTTCTAGTGGTCCTACAACCATGTTCACTATTGGTCCGTATGCCTATGAGACCCAGTTAGTTTCTCCACCTGTGTTTTCCAACTTCACAACTGAACCATCCACTGCTCCTTATACGCCCCCACCAGAATCCGTGCAGCAGACAACACCTTCATCCCCTGAGGTTCCATTTGCTCAATTGTTGGCATCTTCACTGGACCGTGCTCGTAAAAGTAATGGGAATCAGAAGTTTGCATTATACAATTATGAATTTCAGCCTTATCAACAATATCCTGGAAGCCCGGGTGGCCAACTGATATCACCTGGATCAGCAATTTCAACTTCTGGCACCTCAACCCCATTCCCTGATAGACCCCCTACTCTTGAATTCCACAAAGGGGAAACACCAAAGATCTTGGGTGTCGAACACTTCTCCACTCGAAGATGGAGTTCAAGATTAGGATCCGGATCCTTGACACCAGATGGTGCAGGGCAAGGTTCAAGACTAGGTTCAGGATCTTTGACTCCCGATGGTGTTGGGCTTGCTTCACGATTAGGTTCTGGCTGTGGGACACCTGATGGTCTGGGGCAGGAATCCAGGTTAGGTTCAGGCTGTTTGACACCTTTTAGTACTGGACCAACCAATCCAAACAACATCTATGTGCAAAGCCAGCTTCCCAAGGAAGCAACTCTCGCAAACTCGGATGGCACACACCCGAGTAATGCAACAGTAGTTGATCACAGAGTTTCATTTGAATTAACGGGGGAGGATGTTGCTCGATGTCTCGCGAATAAAACGGGGCTTTTGCTTCGAAACATGTCAGGGTCTTCACAGGGTATACTGGCCAAAGACCCTTTTGACAAAGAAAGGGTACAACAAAAAGATCCCAATAGTTGCTGTACAGAGAAAACAGATGACAAGCCTGACAACAATCCTGTAGTAGGAGGAGAGCAATGCTTTGACAAGCAAAATTCTGTAAATTCTTCCAAAGAATTCATTTTTGACAACACAAAAGGTGATGTTTCTGGCACTGCTGCCAATGGCCCTGAGTGGTGGACTAACAAGAAGGTTGCTGGGAAGGAAGGTAGATCATCCAACAGTTGGGCTTTCTTCCCAATGTTACAGTCAGAAATGAACTGA 1491 0.4554 MEGRHSTVETVNAAATAIVTADARAQPTAAPKKRWGGCWSQYWCFGSHKSSKSSKRIGHAVLVPEPVAPTGPAAPAAPNPSTAIVMPFVAPPSSPASFLQSDPPSAIQSPVGLLSLSSLAVNAYSSSGPTTMFTIGPYAYETQLVSPPVFSNFTTEPSTAPYTPPPESVQQTTPSSPEVPFAQLLASSLDRARKSNGNQKFALYNYEFQPYQQYPGSPGGQLISPGSAISTSGTSTPFPDRPPTLEFHKGETPKILGVEHFSTRRWSSRLGSGSLTPDGAGQGSRLGSGSLTPDGVGLASRLGSGCGTPDGLGQESRLGSGCLTPFSTGPTNPNNIYVQSQLPKEATLANSDGTHPSNATVVDHRVSFELTGEDVARCLANKTGLLLRNMSGSSQGILAKDPFDKERVQQKDPNSCCTEKTDDKPDNNPVVGGEQCFDKQNSVNSSKEFIFDNTKGDVSGTAANGPEWWTNKKVAGKEGRSSNSWAFFPMLQSEMN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00699 496 MobiDBLite consensus disorder prediction 409 427 - -
Cca08g00699 496 MobiDBLite consensus disorder prediction 268 334 - -
Cca08g00699 496 MobiDBLite consensus disorder prediction 150 177 - -
Cca08g00699 496 MobiDBLite consensus disorder prediction 320 334 - -
Cca08g00699 496 MobiDBLite consensus disorder prediction 215 252 - -
Cca08g00699 496 MobiDBLite consensus disorder prediction 268 289 - -
Cca08g00699 496 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 495 IPR040420 -
Cca08g00699 496 MobiDBLite consensus disorder prediction 215 239 - -
Cca08g00699 496 MobiDBLite consensus disorder prediction 409 430 - -
Cca08g00699 496 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00699 Cca-Chr8 13086907 13091233 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00699 - - gmx:100806399 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00699 08 13086907 13091233 Cca02g02229 02 42818558 42822286 PCT