Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00684 ATGTCAGGTGGAGTTGGTCCAACAGCCTGCGACATAGCCCTCCCAAAGgatcaagaactagagttcaaagaacaacaagaccaacaacccctcaagaccaatgagctaaacaagaacaagaaAGCATCCCCACAACAGTCCCCACTAGGGATCCTGTCCTTCAGCCAGCTAAACTCGCTGGCAGTAGTAATAGTGGTCTCAGCGAGCGGCATGGTGAGCCTGGAGGACTTCGGGTTCGTGTTCTTCTCCCTAATATACATGTACTTCATCTCCAAGGTGGCCTTCCCCTCTCTGGAGCCCTCTCCCAACGCCATAAACCCCGAAAGCAAGGTCCTGAAACTGTACGAGGGGGTGGGGGCCACCATAGGGCTCTTGGCCCCCATAGCCTACATTCTGGAAGGAGTGTTCGAGGGGGACAAGGAAGGGATAAAAGCGGCGGCGCCGCACGTGTTTCTGTTGGCGAGCCAGGTGTTCATGGAGGGGGTGGCATCGTCGCACAAATTCTCGGCGCCGATAAGGGCTTTTGTGCCAACCTTCTACAATGCCAGGAGGATCTTCACCATCTTGGATTGGCTCAGGAGTGAGGTCTACAAGGGGGATGCTGACAATGGTTGGAGGCTTTACGTTGGGAGAGGCCTTGCCATTGCTAATATCATTTTCTGGTCTTTTAATCTCTTTGGCTTCCTCTTGCCTCTCTATCTGCCCAAGGTTTTGAAGGAGTATTACTCCCAGACTGGAATCGACCACAAGAACCGGTGA 759 0.4875 MSGGVGPTACDIALPKDQELEFKEQQDQQPLKTNELNKNKKASPQQSPLGILSFSQLNSLAVVIVVSASGMVSLEDFGFVFFSLIYMYFISKVAFPSLEPSPNAINPESKVLKLYEGVGATIGLLAPIAYILEGVFEGDKEGIKAAAPHVFLLASQVFMEGVASSHKFSAPIRAFVPTFYNARRIFTILDWLRSEVYKGDADNGWRLYVGRGLAIANIIFWSFNLFGFLLPLYLPKVLKEYYSQTGIDHKNR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00684 252 PANTHER TRANSMEMBRANE PROTEIN 1 245 - -
Cca08g00684 252 MobiDBLite consensus disorder prediction 29 45 - -
Cca08g00684 252 MobiDBLite consensus disorder prediction 24 45 - -
Cca08g00684 252 PANTHER OSJNBA0044M19.10 PROTEIN 1 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00684 Cca-Chr8 12687690 12688885 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00684 - - ccaj:109801516 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00684 08 12687690 12688885 Cca08g00684 08 12687690 12688885 ECH
Cca08g00684 08 12687690 12688885 Cca02g02235 02 42882695 42883240 PCT