Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02235 ATGGGAATATTTGAGGGAGATAAGGAAGGGATCAAAGCTGCTGCACCCCATGTTTTTCTCTTGGCCTGCCAAGTTTTCATGGAAGGGGTGGCATTCTCTGGCAGGTTCTCAACTCCAATAAGAGCTTTTGTGCCTGTCTTTTACAATTCAAGGAGGATTTTCACCATTGTGGATTGGCTTAGGAGCGAGATATACAAAGAGCACAGTGGGTCTGAATGGAGGATCTATGTTGGGAGAGCACTTGCTGTAGCTAATATGGCCTTCTGGTGTTTCAATTTGTTTGGATTTCTGTTGCCTGTTTATCTTCCAAAAGTTTTTAAGTTGTATTACTCTGGCCACAAAGAGGATGACTGA 354 0.4322 MGIFEGDKEGIKAAAPHVFLLACQVFMEGVAFSGRFSTPIRAFVPVFYNSRRIFTIVDWLRSEIYKEHSGSEWRIYVGRALAVANMAFWCFNLFGFLLPVYLPKVFKLYYSGHKEDD 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02235 117 PANTHER TRANSMEMBRANE PROTEIN 2 114 - -
Cca02g02235 117 PANTHER OSJNBA0044M19.10 PROTEIN 2 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02235 Cca-Chr2 42882695 42883240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02235 - - gmx:100797452 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02235 02 42882695 42883240 Cca02g02235 02 42882695 42883240 ECH
Cca08g00684 08 12687690 12688885 Cca02g02235 02 42882695 42883240 PCT