Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00674 ATGGCTTCCCTCGCCCCCACCTGCTCCCCCACCTCCCTCCAGCTCCGATTGGCCTTCGCCGCCCCCAAATTCCCGCGCCCtccgcacgtccgcatccgcacccacagccgccttcgctccctacgcgcctccggctccgAGTGGGCCGGCCCCGGGCCCAGACTCGACGGCCTTTCGGGCTGGTccgacaccgacgccgaccaacgccccgacaccactccgaAGAAGGACTCGTTTGGAGGGGTTGTGGGAGTAGGAGTGGCTGGAGTGCTTCTTCTTTCAGGGCTTACCTTTGCTGCCTTATCTCTTGGCAAACGAACTGGTTCCAGGCCAGGGCAACAGATGAAGCCCTTGACTACACAGCAGGAGGAACACTTGTCTTCTGATGACCATAATGATGAAATAACAGGACAAGTGAATGTTGACAGCAAGGCGGAGCATGGAAATGGTAAAATTGAAGGATCCCAATTGATATATAATAGTAAAATCCCCTCTGATGGTGTTGATGATGCCACTAAACATATATCTGTTCAAGAAGACTTACAGCATGAGTCAGCTTTTGATAACAAGTTAGTTTTTGCCAGTGAAAGCCCAGTACCACTTGAATCTGAAAATACTGTTGATTCTTTTAATGCTTATGGATTTAGAGATTTTGATGGCAACCCTACTGTAGATACAGCAGAATCTACTTCCAATCTTAAAGAAAACCTATTCAATGTTGAACCAGGAGACTTGTCCAACTATGATGATGCTAAGCCACTGCACCTTAATACTGAGCAGCATGATGAAATAACCAGTTCAAGTGGCAGTGTCTCTGCTGAGGGAAACGAGCCATCCTTCAAAGAGCCGAGTGTTACTGGAAATGACCTGTTTGAAAAGTCATCTGTTTCATCATCAGCCAATACATTAGTAGATGAGCAGTATTTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTGCTCCATCAGTATTTTCAGCAGCTGTACAAGTGCTTCCTGGAAAGGTTTTGGTTCCTGCTGCTGTTGATCAGGTTCAGGGGCAAGCACTTGCTGCATTGCAAGTTTTAAAGGTTATTGAGCCAGATGTTCAACCTACTGATTTATGTACCCGTCGTGAATATGCACGTTGGTTGGTGACTGCTAGCAGTGCTCTTTCAAGGTACACAGTTTCAAAAGTGTATCCTGCCATGTACATAGACAATGTTACTGAGCTTGCATTTGATGATGTAACCCCTGAGGACACTGATTTTTCTTCCATTCAAGGATTGGCGGAAGCTGGACTTATTGAAAGCAGGCTTTCAAGACGTGATATACAATTGTCTGCTGAAGAAGATGATAGCCCGTTTTACTTCTCCCCTGAAAGCCCCTTATCACGTCAAGATCTTGTCAGTTGGAAAATGGCCCTGGAGAAAAGACAGCTTCCAGAAGCTGACCACAAGATGCTGTACCAAGTTTCTGGGTTTATAGACACTGATAAGATACATCCTAATGCATGCCCTGCTCTAGTAGCTGACCTATCTGCTGGGGAGAATGGAATAATAGCTCTTGCATTTGGTTATACCAGATTGTTCCAGCCAGATAAACCAGTAACAAAGGCCCAAGCAGCTATGGCTATAGCTACTGGAGATGCTTCTGATATAGTTAGTGAAGAGCTTGCACGCATCGAAGCAGAATCTATTGCTGAAAATGCTGTTGCTGCACATAGTGCTTTAGTAGCTCAAGTAGAGAAGGATATCAATGCAAGTTTTGAGCAGGAGCTATTCATAGAGAGGGAAAAAATCAGTGCTGTTGAAAGAATGGCTGAGGAGGCAAGATTTGAGTTAGAAAGGTTAAGAGCTGAGAGAGAAGAAGAAAACCTTGCACTGATGAAGGAACGTGCTAGTATTGAATCAGAAATGGAGGTTTTTTCAAAGTTGAGGCACGAGGTTGAGGATCAATTACAAAGCCTTATGAATGACAAGGTAGAAATATCACATGAAAAGGAGAGGATTAGCAAGCTTCGGGAACAAGCAGAAGTTGAAAACAAGGAGATTGCTCGTTTACAATATGAGCTAGAGGTTGAACGGAAAGCCCTGTCCATGGCCAGGGCTTGGGCAGAGGACGAGGCCAAACGAGTGAGAGAACAAGCAATAGCCTTAGAGGGGGCCAGAGATCGTTGGGAGAGGCATGGAATCAAAGTGGTAGTTGATGATGACCTTCGCAGAGAGTCCTCGGCAGGAGTTACATGGCTCAACGCCTCCGAGCAGATCTCTGTTCAAGGAACAGTCGACAGGGCTGAAAACTTACTGGGCAAGCTCAAACAGATGGCAGCAGATCTCAGAGGAAAATCTAGAGATACCCTTGACAAAATCATCCACATGGTTTCCCTGTTTATATCAAAATTGAGGGAATGGGCATGCAGAACAAGAAAACAGGCTGAAGAATTTGGGGAAGCTGCCATCTCAAACACAGGTAAGTCAGCCAGTGAGTTGCAGAAGAGTGCCCTTGAATTTGGATTTGGTGTCAAAGAAGGTGCAAAGCGAGTTGCTGGTGATTGTAGAGAAGGGGTTGAGAAAATCACCCAAAAATTCACACAGAAGTTCAAGACCTGA 2610 0.4268 MASLAPTCSPTSLQLRLAFAAPKFPRPPHVRIRTHSRLRSLRASGSEWAGPGPRLDGLSGWSDTDADQRPDTTPKKDSFGGVVGVGVAGVLLLSGLTFAALSLGKRTGSRPGQQMKPLTTQQEEHLSSDDHNDEITGQVNVDSKAEHGNGKIEGSQLIYNSKIPSDGVDDATKHISVQEDLQHESAFDNKLVFASESPVPLESENTVDSFNAYGFRDFDGNPTVDTAESTSNLKENLFNVEPGDLSNYDDAKPLHLNTEQHDEITSSSGSVSAEGNEPSFKEPSVTGNDLFEKSSVSSSANTLVDEQYFXXXXXXXXXXXXXXXXPAPSVFSAAVQVLPGKVLVPAAVDQVQGQALAALQVLKVIEPDVQPTDLCTRREYARWLVTASSALSRYTVSKVYPAMYIDNVTELAFDDVTPEDTDFSSIQGLAEAGLIESRLSRRDIQLSAEEDDSPFYFSPESPLSRQDLVSWKMALEKRQLPEADHKMLYQVSGFIDTDKIHPNACPALVADLSAGENGIIALAFGYTRLFQPDKPVTKAQAAMAIATGDASDIVSEELARIEAESIAENAVAAHSALVAQVEKDINASFEQELFIEREKISAVERMAEEARFELERLRAEREEENLALMKERASIESEMEVFSKLRHEVEDQLQSLMNDKVEISHEKERISKLREQAEVENKEIARLQYELEVERKALSMARAWAEDEAKRVREQAIALEGARDRWERHGIKVVVDDDLRRESSAGVTWLNASEQISVQGTVDRAENLLGKLKQMAADLRGKSRDTLDKIIHMVSLFISKLREWACRTRKQAEEFGEAAISNTGKSASELQKSALEFGFGVKEGAKRVAGDCREGVEKITQKFTQKFKT 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00674 869 MobiDBLite consensus disorder prediction 123 137 - -
Cca08g00674 869 MobiDBLite consensus disorder prediction 223 292 - -
Cca08g00674 869 Coils Coil 600 634 - -
Cca08g00674 869 MobiDBLite consensus disorder prediction 43 80 - -
Cca08g00674 869 MobiDBLite consensus disorder prediction 260 292 - -
Cca08g00674 869 Coils Coil 646 690 - -
Cca08g00674 869 Coils Coil 762 782 - -
Cca08g00674 869 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 1 863 - -
Cca08g00674 869 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 1 863 - -
Cca08g00674 869 MobiDBLite consensus disorder prediction 107 122 - -
Cca08g00674 869 MobiDBLite consensus disorder prediction 223 237 - -
Cca08g00674 869 MobiDBLite consensus disorder prediction 105 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00674 Cca-Chr8 12533882 12542582 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00674 - - gmx:100780360 1326.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00674 08 12533882 12542582 Cca08g00674 08 12533882 12542582 ECH
Cca08g00674 08 12533882 12542582 Cca02g02242 02 42920243 42926480 PCT