Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02242 ATGGCGTCGATCACTGCCCCGAGTTCTCTTCAGATTCGATTAGCTTTCAGTGCTTCCAATTCCACTAAATTCCCAATCCTCCTCCACTCACGCCTCCCCCACTCCGATCGCCGCCTTCGTTTTCTCTGCGTTGCAAATAACGGAAACGGGTCGGACACTCCTCCCATTCGGGTCGGGTCGAATGACCGCTCCGATTCCGAGGTTAAGAACAATGTATCGTATGGAGGAGCTGTGGGAGTGGGGGTGGCTGGAATCTTTCTTCTTTCAGGGCTTGTTTTTGCTGCCTTGTTTGTCAGCAGACGAAACAGTGCCAGACAAACGAAGCCCTTGACTATACATCAGGAAGCGGTTTTATTGTCTGATGATTGTACTGACAGAATAGAATATGTAAAAGCTGGCAACATGGAGCAAGGAAATGGTAATGTGGAAGGTCGGATAGATATATCCAGGGATTGTTCGTCTCCCAAGTCAGATAAGATTCCCAATTGCCATAGAATCGTTGATGATTCTGATGGAGGATTTCAGTTGGTACATGATATTCATAACGTGGACAATGATACCAATACCAGTACACACATATCCATTCAAGAAGAATTGCACCATGGATCAGATGTTGATGCTGAGTCAGTTGTTCCCAGTGAGGGTGGAATGACACTGAATGATTCTGGATTGGAAAAACCAGTTGATTCTTTGGATAGTTATGGATTTAGAGATTTTGATAGTAGCACTGTTGTAGATACAGAATACTCTATTACTGAACTTAAGGAGAACCCATCCTTTGTTGAACAAAGAAATGTGTCCAACTTTGATGCTGACCCCCTACCTGCTATAAGTGAGCAGCAGGATGAAATTCCTGGTTCAAGTGGCAGTAGAAGTTCAAATATTTCTAATGCTTCTAGTTTTGTTGCCGATAATGAAAGTGTACTTGTCAATATTGCTGTCAGTAATCAGTCAAATAAAACAACTTCAGATCCTGAAGATGCAGAAGAGAATGCTCCATCATTTTCAACCAAAGAAAATCTTGACCTGAACAACATGCCACAGGTCATAGACAAGTTGTCCTTGGAGGAGCAGAACTTTTCAGAAAATGACCTCTTTACAAAATCATTTGTCTCATCAACCAATAACTTTATTGACGAACAGATTACAAATGATAATAATGAGGTTAATAAATGTAGATCTGAATCTCCAAATTCTGGAGCCTTTTACTCTGCACCTGGTATTCCTGCTCCATCAGCAGTTTCTGCAGCTGTAAAGGTGCTTCCTGGAAAGGTTTTGGTTCCTGGAGTTGTCGATCAAGTTCAGGGACAAGCATTAGCTGCTTTGCAAGCTATAAGGGTCATTGAACCTGAAGTTCAACCCAGTGATTTATGCACACGCCGTGAGTATGCTCGATGGTTAGTGGCTGCTAGTAGTGCTCTATCGAGGAAAACAATCTCAAAGGTATATCCTGCCATGTACATAGACAATGTTACTGAGCTTGCATTTGATGATATCACCCCTGAGGACCCTGATTTTTCTTCCATTCAAGGTGTGGCAGAAGCTGGACTTATCGAAAGCAGGCTTTCAAGACGTTTTAGACAGTTGTCTACAGACAAAGACTATGGCCCATTTTACTTCTCCCCTGAAAGCCCTTTATCACGTCAGGATCTTGTTAGTTGGAAAATGGTTCTAGAGAATAGACAGCTTCCGGAAGCAGATAGAAAGATGCTGTACCAACTTTCTGGTTTTATAGACGCCGATAAGATACACTCTGATGCATGCCCTGCAATTGTAGCTGATGTATCTGCTGGGGATCATGGAATAATAGCTCTTGCATTTGGTTATACACGATTGTTCCAACCGCATAAACCAGTAACCAAGGCCCAAGCTGCTATAGCCCTTGCTGCTAGAGATGCTTTTGACGTAATTAATGAAGAGCTTGCACGCATTGAGGCAGAAACTTTGGCTGAAAACGCTGTTGCTTCTCATAGTGCTTTAGTAGCTCAAATTGAGAAGGACATCAATGCAAGTTTTGAAGAGAAGCTTTCCATAGAGAGGGAGAAGATCAATGCTGTTGAAAGAATGGCTGAGGAGGCAATATGTGAGTTGGAAAGGTTGAGAGCTGAGAGAGAAGAAGATATAATTTCCTTGATAAAGGAACGAGCTGCCATTGAAACGCAAAGGGATGTTTTTTCTAGTTTAAGACATGAGGCGGAGGACCAACTACAAAACCTTATTGGTAACAGGGTAGAAATAGCTTATGAAAAAGAGAGGATTAGCAAGCTTCGGGAGCTAGCAGAAGTTGAAAACAAGGATATTACACGATTACAGTATGAGCTAGAGATTGAACGAAAAGCCTTGTCAATGGTCAGGGCATGGACAGAGGACGAGGCCAAACGAGTCAGGGAACATGTAGTGGCCTTGGACAGGGCTAGAGATCGTTGGGAGAGGAATGAAATCAAAGTGGTAGTTGATGATGATATCTGTGAGGACTCTGCCGAGGAGCCGTTATCGGTTCAAGACACGGTTGACAGTGCTGACAACTTAGTGGACAAGCTAAAAGAAATGGCAGCAGATGTGAGGGGAAGATCTAGAGATATGATTGACAAGATTATCCACATAATTTCTCACATCGTAACAAGATTGAGAGAATGGGCATGCAAAACTAGAAAACAAACTGAAGAATTGAGAGAAGCTGCCATCTCAAAGGCAAGTAAGTCAGCTCATGAGGTGCAGCAAAGTGCCTTTGATCTTGGATTTGCCATCAAAGAAGGGGCAAAGCGAGTTGCAGATGACTGTAGAGAAGGAGTTGAGAAGCTCACTCAAAAGTTCAAGACCTGA 2823 0.429 MASITAPSSLQIRLAFSASNSTKFPILLHSRLPHSDRRLRFLCVANNGNGSDTPPIRVGSNDRSDSEVKNNVSYGGAVGVGVAGIFLLSGLVFAALFVSRRNSARQTKPLTIHQEAVLLSDDCTDRIEYVKAGNMEQGNGNVEGRIDISRDCSSPKSDKIPNCHRIVDDSDGGFQLVHDIHNVDNDTNTSTHISIQEELHHGSDVDAESVVPSEGGMTLNDSGLEKPVDSLDSYGFRDFDSSTVVDTEYSITELKENPSFVEQRNVSNFDADPLPAISEQQDEIPGSSGSRSSNISNASSFVADNESVLVNIAVSNQSNKTTSDPEDAEENAPSFSTKENLDLNNMPQVIDKLSLEEQNFSENDLFTKSFVSSTNNFIDEQITNDNNEVNKCRSESPNSGAFYSAPGIPAPSAVSAAVKVLPGKVLVPGVVDQVQGQALAALQAIRVIEPEVQPSDLCTRREYARWLVAASSALSRKTISKVYPAMYIDNVTELAFDDITPEDPDFSSIQGVAEAGLIESRLSRRFRQLSTDKDYGPFYFSPESPLSRQDLVSWKMVLENRQLPEADRKMLYQLSGFIDADKIHSDACPAIVADVSAGDHGIIALAFGYTRLFQPHKPVTKAQAAIALAARDAFDVINEELARIEAETLAENAVASHSALVAQIEKDINASFEEKLSIEREKINAVERMAEEAICELERLRAEREEDIISLIKERAAIETQRDVFSSLRHEAEDQLQNLIGNRVEIAYEKERISKLRELAEVENKDITRLQYELEIERKALSMVRAWTEDEAKRVREHVVALDRARDRWERNEIKVVVDDDICEDSAEEPLSVQDTVDSADNLVDKLKEMAADVRGRSRDMIDKIIHIISHIVTRLREWACKTRKQTEELREAAISKASKSAHEVQQSAFDLGFAIKEGAKRVADDCREGVEKLTQKFKT 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02242 940 Coils Coil 669 703 - -
Cca02g02242 940 ProSiteProfiles S-layer homology (SLH) domain profile. 574 642 IPR001119 -
Cca02g02242 940 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 5 940 - -
Cca02g02242 940 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 5 940 - -
Cca02g02242 940 MobiDBLite consensus disorder prediction 316 340 - -
Cca02g02242 940 MobiDBLite consensus disorder prediction 198 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02242 Cca-Chr2 42920243 42926480 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02242 - - gmx:100801281 1266.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02242 02 42920243 42926480 Cca02g02242 02 42920243 42926480 ECH
Cca08g00674 08 12533882 12542582 Cca02g02242 02 42920243 42926480 PCT