Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00670 ATGCCTTGCTCTTCCCTCACTTCCACCGCCGGCGATaacagcaacagcaacagcagcaacaacaacaagaaAGATGGTTCTTCTCTCCGCGACTTCAAGCTGAACGAATCAACCTTCTTAGCCTCGCTCATGCCTAAGCAAGAGATTGGCGTCGATCGCTTCCTCGACGCGCATCCTGAGTACGACGGTCGCGGCGCTCTCATCGCTATCTTCGATTCTGGTATAGACCCGGCTGCTGATGGATTACAGGTTACCTCAGATGGGAAACCAAAAGTTCTCGATGTCATTGATTGCACTGGGAGTGGTGATATTGATACCTCAAAGGTGGTGAAGGCTGATGCTGATGGTCATATTTTTGGGGCATCAGGGGCATCATTGGTTATCAATACTTCATGGAAAAATCCTTCTGGTGAATGGCATGTGGGTTATAAATTGGTTTATGAGCTATTCACAGAAGATTTGATTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAGTGGGATGAGAAAAACCAAGAGGAAATTGCTAGGGCTGTAAAACAACTTGCTGACTTTGATCAGCAACACATCAAGGTAGAGGATGTAAAACTTAAAAGGACCCGTGAAGATCTCCAGAATAGACTTGATATTCTGAGAAAGCAATCTGAGAGCTATGATGATAAAGGGCCTGTCATAGATGCTGTTGTCTGGCATGATGGAGAGGTTTGGAGGGTTGCCCTTGACACACAGAGTCTGGAGGATGATCCAAATTGTGGGAAGCTTGCTAATTTTATACCTTTAACTAACTATAGGATTGAGAGGAAGTACGGTGTCTTCAGCAAATTAGATGCTTGTACATTTGTTGTTAATGTCTACAGTGACGGAAATGTTTTAAGTCTTGTAACAGACTGTTCTCCACATGCCACCCATGTTGCTGGTATAGCTACTGCTTTCCACCCAAAGGAGCCCCTGTTGAATGGAGTTGCACCTGGCGCACAAATAATATCTTGTAAAATTGGGGATTCTCGCTTAGGTTCAATGGAAACAGGAACTGGTTTGATTCGGGCGTTGATTGAAGCTGTGGAGCATAAGTGTGACCTTATCAACATGAGTTATGGTGAAGCAACATTATTGCCAGACTATGGACGCTTTGTTGACCTTGTGAATGAAGTGGTGAACAAGCATCGTCTGATATTTGTGAGCAGTGCTGGTAATAGTGGGCCAGGATTGAGCACTGTTGGTGCACCTGGTGGTACATCTTCAAGCATCATAGGTGTGGGTGCATATGTGTCTCCTGCTATGGCTGCCGGTGCTCATTGTGTTGTTGAACCTCCACCTGAGGGGCTTGAATACACTTGGTCTAGCCGAGGACCAACAGCAGATGGAGACCTTGGTGTTTGTGTGAGTGCTCCTGGTGGTGCTGTAGCTCCTGTTCCCACGTGGACTCTTCAACGGCGTATGCTCATGAATGGGACATCAATGGCATCACCATCAGCCTGTGGAGGAACTGCATTGCTCATAAGTGCAATGAAGGCCGAGGGAATCCCTGTGAGTCCATACAGTGTGAGGAAGGCTCTTGAAAATACTGCAGTTCCCATAGGGGATTTACCTGAGGATAAATTATCCACTGGACAAGGGCTTATGCAAGTTGACAAGGCTTTTGAATATATACAGAAGTGTCAAAATGTTCCATGTGTTTGCTATCAAATAAAAATTCAGCAATCTGGAAAAACAAATCCTTCATCAAGGGGCATCTACCTTAGGGAGGCTAGTGCTTGCCGACAATCTACTGAGTGGACAGTGCAAGTTAATCCAAAATTTCATGAAGATGCTGGAAACTTAGAGGATTTGGTTCCATTTGAGGAGTGCATTGAATTACATTCTACAGAAGAGACAGTTGTGAAGGCCCCTGATTATCTATTGCTCACTCATAATGGTCGCACCTTCAATGTAGTGGTAGATCCTTCCAATCTTTGCGATGGTCTTCATTATTTTGAGGTCTATGGTATTGACTGCAAAGCTCCATGGCGTGGTCCTCTTTTCAGAATTCCGATCAGCATAACAAAGCCCAAGGCCATAATTAACCAGCCACCACAAATTTCATTTTCAAAGATGTTATTCCAGCCAGGCCATATAGAAAGGAGATATATAGAAGTGCCACATGGTGCATCTTGGGCCGAAGCAACAATGAAAACATCAGGTTTTGACACAGCACGAAGATTTTATGTGGATGCTATTCAGATGTGCCCATTACGAAGGCCTTTGAAATGGGAGAGTGCAGTAACTTTTCCTTCTCCTGCTGCCAAAAGCTTTGCCTTTAGGGTAGTAAGTGGTCAGACATTGGAACTAGTCATTTCACAGTTTTGGTCAAGCGGCATAGGGAGTCATGAGACTGCGAGTGTGGATTTTGAGGTTGTGTTTCACGGGATAAAAGTCAATCAAGAAGAAGTTGTACTCGATGGTAGTGACGCACCAGTCAGGATTGATGCTGAAACACTACTGGTATCCGAGGAACTTTCACCTGTGGCAATTCTTAACAAGATTAGGGTCCCATATCGACCAGTAGATTCTAAGATTAGTGCACTTTCAACAGATCGTGACAAACTTCCTTCTGGAAAGCAGATACTGGCACTGACTTTGACCTACAAGATCAAATTGGAAGATGGAGCTCAAGTAAAACCTCATATACCATTGCTAAATGACAGGATATATGACACTAAATTTGAGTCTCAATTTTATATGATTTCTGACTCAAATAAGCGCATATATTCAAGTGGAGATGTCTATCCAAGCTCTTCTAATCTTCCCAAGGGAGAATATACTTTACAGTTATATTTGAGGCATGACAATGTGCAGATTTTGGAGAAGATGAGGCATCTGGTGTTATTCATTGAGCGAAATTTGGAAGAAAAGGATGTCATTCGGTTAAGTTTTTTCTCTCAACCTGATGGCCCACTGATGGGAAATGGTTCCTTTAAGTCCTCATCATTAGTTCCAGGTATAAAAGAAGGATTATATATTGGTCCACCACCAAAAGAAAAGCTTCCCAAGAATTCTCCACAAGGATCTGTATTGCTAGGGGCAATTTCATATGGGAAACTATCATTTGCTGATCAGGGAGAGAACAAAAATCCTGAAAAGAACCCTGCATCATATCGGATATTTTATGTAGTTCCCCCAAATAAGATTGATGAGGACAAGGGAAAAGGTTCTTCTATATCTTCCAAGAAGAATGTTTCAGAACGTTTAAAAGAAGAGGTAAGAGATGCAAAAATAAAAGTTCTAGCAAGCCTAAAACAAGAAACTGATGAAGAGCGCTTGGAATGGAAAGAGCTATCCGCCTTGCTTAAATCAGAATATCCAAAGTACACTCCATTACTTGCCACGATTTTGGAAGGTTTAGTTTCTAGCAGTAATGTCAAAGACAAAATCCATCGTGATGAAGAGGTGATTGATGCAGCCAATGAGGTGATTAACAGTATTGACAGAGAAGAGCTGGCAAAGTTTTTTGCACTAAAAAATGATCCAGAAGATGAGGAAGCAGAGAACATCAAGAAAAAGATGGAGTTAACCCGAGACCAATTGGCAGAGGCCATGTACCAAAAGGGGCTTGCACTGGCAGAGATCGAGTCTATAAAGGACGTAGATAAGTCCCCGGGTTTGGTTACCACAGAAGAGGCAAAAGACATGGACCAAAAACAATCTACGGATGATCGTGGTCATGAAGATTTGTTTGAAGAGAATTTTAAAGAACTGAAGAAATGGGTTGATGTGAAGTCAACTAAATATGGAATCCTCTTGGTAACACGTGAGAGGCGTGCTCAAAGGCTTGGGACAGCTTTGAAGGTACTGTGTGACATAATTCAAGATGATGCAGAGCCTGCCAAGAAGAAATTCTATGAGCTAAAGCTCTCTTTGCTTGATGAGATGGGATGGACACATTTAGCTGCATATGAGAGACAGTGGATGCATGTGCGTTTCCCGCCAAGCTTGCCTCTTTTCTAG 3981 0.4248 MPCSSLTSTAGDNSNSNSSNNNKKDGSSLRDFKLNESTFLASLMPKQEIGVDRFLDAHPEYDGRGALIAIFDSGIDPAADGLQVTSDGKPKVLDVIDCTGSGDIDTSKVVKADADGHIFGASGASLVINTSWKNPSGEWHVGYKLVYELFTEDLISRLKKERKKKWDEKNQEEIARAVKQLADFDQQHIKVEDVKLKRTREDLQNRLDILRKQSESYDDKGPVIDAVVWHDGEVWRVALDTQSLEDDPNCGKLANFIPLTNYRIERKYGVFSKLDACTFVVNVYSDGNVLSLVTDCSPHATHVAGIATAFHPKEPLLNGVAPGAQIISCKIGDSRLGSMETGTGLIRALIEAVEHKCDLINMSYGEATLLPDYGRFVDLVNEVVNKHRLIFVSSAGNSGPGLSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPPEGLEYTWSSRGPTADGDLGVCVSAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGTALLISAMKAEGIPVSPYSVRKALENTAVPIGDLPEDKLSTGQGLMQVDKAFEYIQKCQNVPCVCYQIKIQQSGKTNPSSRGIYLREASACRQSTEWTVQVNPKFHEDAGNLEDLVPFEECIELHSTEETVVKAPDYLLLTHNGRTFNVVVDPSNLCDGLHYFEVYGIDCKAPWRGPLFRIPISITKPKAIINQPPQISFSKMLFQPGHIERRYIEVPHGASWAEATMKTSGFDTARRFYVDAIQMCPLRRPLKWESAVTFPSPAAKSFAFRVVSGQTLELVISQFWSSGIGSHETASVDFEVVFHGIKVNQEEVVLDGSDAPVRIDAETLLVSEELSPVAILNKIRVPYRPVDSKISALSTDRDKLPSGKQILALTLTYKIKLEDGAQVKPHIPLLNDRIYDTKFESQFYMISDSNKRIYSSGDVYPSSSNLPKGEYTLQLYLRHDNVQILEKMRHLVLFIERNLEEKDVIRLSFFSQPDGPLMGNGSFKSSSLVPGIKEGLYIGPPPKEKLPKNSPQGSVLLGAISYGKLSFADQGENKNPEKNPASYRIFYVVPPNKIDEDKGKGSSISSKKNVSERLKEEVRDAKIKVLASLKQETDEERLEWKELSALLKSEYPKYTPLLATILEGLVSSSNVKDKIHRDEEVIDAANEVINSIDREELAKFFALKNDPEDEEAENIKKKMELTRDQLAEAMYQKGLALAEIESIKDVDKSPGLVTTEEAKDMDQKQSTDDRGHEDLFEENFKELKKWVDVKSTKYGILLVTRERRAQRLGTALKVLCDIIQDDAEPAKKKFYELKLSLLDEMGWTHLAAYERQWMHVRFPPSLPLF 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00670 1326 Pfam Tripeptidyl peptidase II 826 1010 IPR022229 -
Cca08g00670 1326 MobiDBLite consensus disorder prediction 1 25 - -
Cca08g00670 1326 Gene3D Peptidase S8/S53 domain 46 139 IPR036852 GO:0004252|GO:0006508
Cca08g00670 1326 Gene3D Peptidase S8/S53 domain 223 557 IPR036852 GO:0004252|GO:0006508
Cca08g00670 1326 Coils Coil 193 220 - -
Cca08g00670 1326 Gene3D - 1069 1326 - -
Cca08g00670 1326 Gene3D - 559 692 - -
Cca08g00670 1326 PRINTS Subtilisin serine protease family (S8) signature 63 82 IPR015500 -
Cca08g00670 1326 PRINTS Subtilisin serine protease family (S8) signature 295 308 IPR015500 -
Cca08g00670 1326 PRINTS Subtilisin serine protease family (S8) signature 482 498 IPR015500 -
Cca08g00670 1326 SUPERFAMILY Subtilisin-like 44 556 IPR036852 GO:0004252|GO:0006508
Cca08g00670 1326 Pfam Subtilase family 63 526 IPR000209 GO:0006508|GO:0008236
Cca08g00670 1326 Gene3D - 161 219 - -
Cca08g00670 1326 Coils Coil 1173 1193 - -
Cca08g00670 1326 ProSiteProfiles Serine proteases, subtilase domain profile. 48 546 - -
Cca08g00670 1326 Coils Coil 1065 1085 - -
Cca08g00670 1326 PANTHER PEPTIDASE S8 14 1220 - -
Cca08g00670 1326 PANTHER TRIPEPTIDYL PEPTIDASE II 14 1220 - -
Cca08g00670 1326 ProSitePatterns Serine proteases, subtilase family, serine active site. 483 493 IPR023828 -
Cca08g00670 1326 MobiDBLite consensus disorder prediction 1 29 - -
Cca08g00670 1326 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 43 525 IPR034051 GO:0006508|GO:0008240
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00670 Cca-Chr8 12430864 12452072 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00670 K01280 - gmx:100798235 2459.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00670 08 12430864 12452072 Cca08g00670 08 12430864 12452072 ECH
Cca08g00670 08 12430864 12452072 Cca02g02248 02 43010086 43029780 PCT