Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00562 ATGGGTTCGAATCCGTCGTTTGTTCCTCAGATCGGCCCCGATGGCATCCCCAGAGAATCTCCCGTTATCAGTTACACCGAACAGATAATCGAAGCAGAGCAACTTCAATTGAAGAAGTACATTCAAGAAAACTATTCGAAAATTCGCGATGTCGAGCGGGAGCTTGCAAATCTTGGATTGGAGATGAAGCTTACATCTGGACCAAAGAAAGCAGCGCTGGAGCATTTGAGGAAGAAGATAGAGGCATCAACCGAGAAAGTTCGTGTGGCAAAGCTAAAGGAAGAACAAGCACGTGTGGTGTGGGAATCAGCATCAAAAGCAGTGAGGGATGAAGAAGCAATCAAGCAGAAGTTATGTGAAGACTTGAGCAAACTGGTTGAAGAGAGCAATAAATCTCAGTTGTCTAGGCTGGAGGAACTGAAAAGACGATTGGAAGCTATGAATCCTAATCGAAGTTCAACTATTCTTCAAAATGATGGGAGATCAACTTCTCTGGACAGTGCAAGCCCAGATGGTTCTGTTTCCAACACAAGGGAATCAAATGGAGGACTGGTTGAGAATGTTCCAAACAAAAATAATGGTCAGGGTCAGGAAGTTCCAGTGACGAATGAGCATAAACTGCAGCCTCCTAGTGAAGGAGAAGGAAGAAACAAAAAGAAAATTAACTTTCAGTCAAGAGGCAAAGGAATTGGTGCAGTGCCCAAGACTAGATCTTCAACTCCTGGCTGGACTGGTTCTGGCTTTGATGTAGATGGCAGAACATGA 765 0.4431 MGSNPSFVPQIGPDGIPRESPVISYTEQIIEAEQLQLKKYIQENYSKIRDVERELANLGLEMKLTSGPKKAALEHLRKKIEASTEKVRVAKLKEEQARVVWESASKAVRDEEAIKQKLCEDLSKLVEESNKSQLSRLEELKRRLEAMNPNRSSTILQNDGRSTSLDSASPDGSVSNTRESNGGLVENVPNKNNGQGQEVPVTNEHKLQPPSEGEGRNKKKINFQSRGKGIGAVPKTRSSTPGWTGSGFDVDGRT 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00562 254 Coils Coil 73 93 - -
Cca08g00562 254 PANTHER ACI13 1 250 - -
Cca08g00562 254 MobiDBLite consensus disorder prediction 148 204 - -
Cca08g00562 254 Coils Coil 127 147 - -
Cca08g00562 254 MobiDBLite consensus disorder prediction 148 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00562 Cca-Chr8 9366865 9371819 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00562 - - gmx:100778211 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00562 08 9366865 9371819 Cca08g00562 08 9366865 9371819 ECH
Cca08g00562 08 9366865 9371819 Cca02g02306 02 43750135 43754123 PCT