Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02306 ATGGCTTCGAACCCTTCTCTTCTCCCTGAGATCGGACCCGACGGTCTCCCTAAAGAAGCTCCCGTCATCAGCTACACCGAGAAGATCATCGAAGCAGAACAGCTTCAATTGCAGAAATACATTCAAGAAAACTATTCTAAAATTCGTGATGTGGAGCGTGAGCTTGCAAATCTTTCACTGGAGATGAAACTTACAGCTGGGCCAAAAAAAGCAGCACTTGAACATTTGAGAAAGAAGATAGAGGCATCGACAGAAAAAATCCGCATGGCCAAGCTAAAGGAAGAACAGGCACGAAAGGTGTGGGAATCAGCATCAAAAGTAGTAAGAGACGAGGAATCCATAAAGCAAAAGCTATGTGAAGACTTGAGTAATCTGGTAAATAGTGTTAAAAGAAGACATAATATGCTACTGTTTAGCTGGTTGTTTGACACTAATCTTATACAGGTTCAAGAAAGCAGTAACTCTCAGTTTGCTCGGCTGGAAGAATTAAAAAGAAGATTGGAAGCTCTGAATCCTAGTCGCGCATCAACTAATCTTTATCATGATGGGAGATCAGGAGGTTCTTCTCTGGATAGTATAGCCCAACATGGTTCCTCTGTTCCCAATGCAAAGGAATCAAATGAGGGATCAACCGAGAGTGTTCCCAACCAAAGTAATGGTCAGAAAGTCGCAGTGACAAATGAGCCTAATCAGCAGCCTCAAAATGAAGGCGAAGGAAGAAGTAAAAAGAAAGTGAACTACCAATTAAAAGGAAAGGGAATCGGTGCTGTGGCCAAGGGTAGGTCTTCTACTCCTGGATGGACTGGGGCTGGCTTCGATGTTGATGGTAGAACCTGA 837 0.4325 MASNPSLLPEIGPDGLPKEAPVISYTEKIIEAEQLQLQKYIQENYSKIRDVERELANLSLEMKLTAGPKKAALEHLRKKIEASTEKIRMAKLKEEQARKVWESASKVVRDEESIKQKLCEDLSNLVNSVKRRHNMLLFSWLFDTNLIQVQESSNSQFARLEELKRRLEALNPSRASTNLYHDGRSGGSSLDSIAQHGSSVPNAKESNEGSTESVPNQSNGQKVAVTNEPNQQPQNEGEGRSKKKVNYQLKGKGIGAVAKGRSSTPGWTGAGFDVDGRT 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02306 278 Coils Coil 73 93 - -
Cca02g02306 278 MobiDBLite consensus disorder prediction 176 236 - -
Cca02g02306 278 MobiDBLite consensus disorder prediction 176 278 - -
Cca02g02306 278 Coils Coil 41 61 - -
Cca02g02306 278 PANTHER ACI13 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02306 Cca-Chr2 43750135 43754123 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02306 - - gmx:100801668 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02306 02 43750135 43754123 Cca02g02306 02 43750135 43754123 ECH
Cca08g00562 08 9366865 9371819 Cca02g02306 02 43750135 43754123 PCT