Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02507 ATGAATTGTTATAATCTTCAGAAGAATGCTTTCTCATCTTGTGAAGAGAGGAGAGGCTCTCTTCCCATTGCTGATCAGAATGGACCTGTCATTTGCCCTAAGCCACGTCGAGCTGGGGTTTTAATGAATCTGCCTATAAGGCCGGTAAAATGGCATGTAAGTCATCAAGCTGAGGGTTCTGATTCAAGAGCTGGGGCTGAGCTACTCGACATTGTTCTCAAGAGGGACATTGTTCTCAAGAGGGAAAATTATGTGGAAGAATTCACAAATTCATCTCCTCCGTATTTATGTGGTTCTCCTCCAGTCCGAGCTGCTAATCCCTTGATCCAGGATGCTCGGTTTGGACACGAAGAGAACACTCTTGTATCAACAATTTCATCACCTTCAGGTTTACTGTCTCCATCTTCAGCATCTCGTAAAGGAGGATGTGCTAGGATGAAGTTTGGACTTAAACCTGCCGCTGTTAGAGTAGAAGGATTTGATTGCCTCGGCAGGGATTGCCAGAATTCCGGCATCCCAGCTGTTGCTTAA 531 0.452 MNCYNLQKNAFSSCEERRGSLPIADQNGPVICPKPRRAGVLMNLPIRPVKWHVSHQAEGSDSRAGAELLDIVLKRDIVLKRENYVEEFTNSSPPYLCGSPPVRAANPLIQDARFGHEENTLVSTISSPSGLLSPSSASRKGGCARMKFGLKPAAVRVEGFDCLGRDCQNSGIPAVA 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02507 176 PANTHER BNAC02G06400D PROTEIN 1 176 - -
Cca07g02507 176 PANTHER EXPRESSED PROTEIN 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02507 Cca-Chr7 53890227 53892495 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02507 - - gmx:100807321 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02507 07 53890227 53892495 Cca08g00226 08 3161515 3163500 ECH
Cca07g02507 07 53890227 53892495 Cca07g02507 07 53890227 53892495 ECH
Cca02g02660 02 47908132 47908866 Cca07g02507 07 53890227 53892495 ECH