Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02660 ATGAAGCAGTTTTCCATCCAAAACGTCGTCGTTCCATCCCACGAAGAGAATAGCGTCGTTTGCCCCAAGCCCCGCCGCCTCGGCCTCTTCAACTTCGCCGCCAACGAACACCCTGTCAGACCCTTCCGGTGGCATCTAAGTTGCCAGGTTGAACCATGTGATTCAAACTCGTCTGGCTCAAATCCTTTGGACAACATACTCTCCAAGGAGAGTGATTTTGATGTAGAGCAATCGTGGCCAGTGGTAGCCTCGCCGCCCCCATTTTTCTGCGGGTCGCCGCCGAGCAGAGTAGCTAACCCTTTGATTCAGGATGCTCGATTTGGGGAAGAGAATTTTTCCCCGCTCTCACCACCGTCGTGGGCGGTGGCTCCGGCTGCTGTGTCGGGTCTGCCACCGTCTCCCTCTTCCTCAGCAAGGAAGGGAGGGTGTGTTCGAGCCAATTTTGGTAACAATCCATCTGTGAGAATTGAGGGGTTTGATTGCCTTGACAGGGACAGGCGAAATTGCAGCATCCCTGCTCTGGCCTAG 528 0.5492 MKQFSIQNVVVPSHEENSVVCPKPRRLGLFNFAANEHPVRPFRWHLSCQVEPCDSNSSGSNPLDNILSKESDFDVEQSWPVVASPPPFFCGSPPSRVANPLIQDARFGEENFSPLSPPSWAVAPAAVSGLPPSPSSSARKGGCVRANFGNNPSVRIEGFDCLDRDRRNCSIPALA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02660 175 PANTHER EXPRESSED PROTEIN 9 175 - -
Cca02g02660 175 PANTHER BNAA07G24630D PROTEIN 9 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02660 Cca-Chr2 47908132 47908866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02660 - - gmx:100527343 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02660 02 47908132 47908866 Cca02g02660 02 47908132 47908866 ECH
Cca02g02660 02 47908132 47908866 Cca08g00226 08 3161515 3163500 ECH
Cca02g02660 02 47908132 47908866 Cca07g02507 07 53890227 53892495 ECH