Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02085 ATGGGCTGCACCGCCTCCAAGCTGCAAAACGAGGACACGGTGCGTCGCTGCAAGGACCGCCGCCGCCTCATGAAGGAGGCCGTCTACGCGCGACACCACCTCGccgccgcccactccgactactgccgctccctccgcctcaccggctccgccCTCTCCACGTTCGCCGCCGGCGAACCCCTCTCCATCTCCGAGCACACGCCGGCCGTCTTCCTGAGCTCCCAGCAGCCCCAGGCCCCCTCCCCTCCACCCCCTCGGCCGCCCTCCCCTTCGCCTCCCCCTCAGCCGAAGCTCCTCCCGCGGCGGCGTAAAGCTCCGGCGCAGAAACTCCCCCACATTCTCTCGGACTCAAGCCCCTCCTCCACCCCCCGAAGCCACGTGTCGAACTTGTTCCCCACCGCACACTCGACCTACTCCTCCACCCCTTCCCAAACCTCCTCCGTTTGGAATTGGGAAAACTTTTACCCTCCTCCACCCCCTCCCGCTTCTGATTACTTCCCCGAAGAAGATAAAATCTCTCTatcacaatcacacacacaatcacaatcacaatcacaatcacaatcacaCacgcaaacacagacccaaacgcaaacacaaacACCCTCTCATTACTCTCACAACTCACAAAACACCATTCCCCAACCGCACGACACCGACTCCGAGAGATCTGAATACGATTACTTCCACGAGAAGCTTCAATCGCAGAAGAACcactctctctctccctctcactctcactctcactctcactctcaTCATCTTCAGGAGGAGTATACCGAGACTGAGAGGGAGGAGGTTCAGTGTAGTGAGTGGGGGGATCACTACAGCACCACCAGTTCCTCCgatgatgatgatgatgatggggttgaggaggatgTCGAGTCCAGGTCTGAAATCGGGACACGGTCGAATTTCGGCTCCTCTGTGCGGGCGGAGAGTGTTGCTGCGGGTGTTAAGGGTGGTGGAGGTGGCGGTGGCTTTGACGCGGCCTCGTCCGTGGCGGAGATGAAGATGGTGGTGAGGCATAGGGACTTGAAAGAGATCGTGGAGGCCATTAAAGAGAATTTCGACAACGCTGCTTCTGCTGGGGATCAGGTTTCTGAGATGCTCGAGATCAGCAAGGCTCAGCTTGATCGCAGCTTCAGACAATTGAGGAAAACTGTGTATCACTCGAGTAGCATATTGAGCAACTTGAGCTCGAGTTGGCCCTCGAACCCGCCGCTGGCGGTTAAGTACCGGCTTGACGCCGGTTCACTGGAAGAACCGGGCGGTCCGAAGAGTCTTTGCTCCACTTTGGAACGGCTTTTGGCTTGGGAGAAGAAACTCTACGAGGAGGTTAAGGCTAGAGAAGGTGTGAAGATTGAACATGAAAAGAAATTGTCAGCCCTGCAGACTCAGGAATACAAAGGAGAGGATGAAGCTAAGATATTCAAAACCAAGACTTCCATAAATAGGCTGCAGTCGCTAATAGTTGTTACATCTCAGGCTGTGTCTACCACCTCAACTGCAATTATTGGCCTTAGGGACTCTGATCTTGTCCCTCAGCTTGTTGATCTTTGCCATGGATTCATGTACATGTGGAAAGCAATGCACCATTACCATGAAATTCAAAGCAACATAGTGCAGCAAGTCCAGGGTCTGGTGAACAGATCATCCAGGGGAGACTCCACTTCTGAACTGCACAGGCAGGCAACTCGGGACCTTGAATCGGCTGTGTCAGCTTGGCACTCCAGTTTCTGTCGCCTTATAAAATTTCAGCGCGACTTCATCCTGTCCTTGCATGGCTGGTTCAAGCTCAGCCTCCTTCCAGTCAACAATGATAACATCAATAACAACAGTAGGGAAACCTCTGATACATACCACTTTTTTGATGAATGGAAACTCGCACTTGACCGTGTCCCCGACACGGTTGCATCTGAAGCCATCAAGAGCTTCATCAATGTTGTCCATGTGATATCCTCCAAGCAAGCTGAAGAGCTCAAGATAAAGAAACGAACCGAAACAGCTTCCAAGGAACTTGAGAAGAAGGCTTCTTCTCTGAGAAACATAGAGAGGAAATTCTACAACTCATATTCTATGGTAGGCATTAGCCTCCCTGATTCTGCACCTGACAATGGACAAGGCTTGGATGCACGTGACCCACTTTCCGAGAAAAAACTGGAGCTGGCAACCTGTCAAAGGCGCGTGGAAGATGAAATGCTGAGACATTCAAAAGCTGTGGAAGTAACAAGAGCCATGACTCTCAACAATTTGCAAACAGGCTTGCCTGGAGTATTTCAGGCATTGACCAGTTTCTCTTCCTTGTTCACTGAGGCTCTTGAATCAGTGTGTACTCGTTCATATGCCATCAAGTAG 2358 0.4767 MGCTASKLQNEDTVRRCKDRRRLMKEAVYARHHLAAAHSDYCRSLRLTGSALSTFAAGEPLSISEHTPAVFLSSQQPQAPSPPPPRPPSPSPPPQPKLLPRRRKAPAQKLPHILSDSSPSSTPRSHVSNLFPTAHSTYSSTPSQTSSVWNWENFYPPPPPPASDYFPEEDKISLSQSHTQSQSQSQSQSHTQTQTQTQTQTPSHYSHNSQNTIPQPHDTDSERSEYDYFHEKLQSQKNHSLSPSHSHSHSHSHHLQEEYTETEREEVQCSEWGDHYSTTSSSDDDDDDGVEEDVESRSEIGTRSNFGSSVRAESVAAGVKGGGGGGGFDAASSVAEMKMVVRHRDLKEIVEAIKENFDNAASAGDQVSEMLEISKAQLDRSFRQLRKTVYHSSSILSNLSSSWPSNPPLAVKYRLDAGSLEEPGGPKSLCSTLERLLAWEKKLYEEVKAREGVKIEHEKKLSALQTQEYKGEDEAKIFKTKTSINRLQSLIVVTSQAVSTTSTAIIGLRDSDLVPQLVDLCHGFMYMWKAMHHYHEIQSNIVQQVQGLVNRSSRGDSTSELHRQATRDLESAVSAWHSSFCRLIKFQRDFILSLHGWFKLSLLPVNNDNINNNSRETSDTYHFFDEWKLALDRVPDTVASEAIKSFINVVHVISSKQAEELKIKKRTETASKELEKKASSLRNIERKFYNSYSMVGISLPDSAPDNGQGLDARDPLSEKKLELATCQRRVEDEMLRHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALESVCTRSYAIK 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02085 785 MobiDBLite consensus disorder prediction 77 100 - -
Cca07g02085 785 Pfam Protein of unknown function (DUF632) 346 651 IPR006867 -
Cca07g02085 785 PANTHER UNCHARACTERIZED 1 785 - -
Cca07g02085 785 MobiDBLite consensus disorder prediction 170 217 - -
Cca07g02085 785 MobiDBLite consensus disorder prediction 250 271 - -
Cca07g02085 785 MobiDBLite consensus disorder prediction 218 234 - -
Cca07g02085 785 PANTHER BZIP DOMAIN CLASS TRANSCRIPTION FACTOR (DUF630 AND DUF632)-RELATED 1 785 - -
Cca07g02085 785 MobiDBLite consensus disorder prediction 151 311 - -
Cca07g02085 785 MobiDBLite consensus disorder prediction 72 129 - -
Cca07g02085 785 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Cca07g02085 785 Coils Coil 664 684 - -
Cca07g02085 785 MobiDBLite consensus disorder prediction 113 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02085 Cca-Chr7 48624841 48630414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02085 1 94 Acyl Lipid Metabolism Gene Families AT2G27090 33.684 6.41e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02085 - - gmx:778134 1165.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02085 07 48624841 48630414 Cca07g02085 07 48624841 48630414 ECH
Cca01g01583 01 35544611 35551583 Cca07g02085 07 48624841 48630414 PCT