Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01583 ATGGGTTGCACGGCGTCCAAACTGGACAACGAGGAAACTGTGAAGCGCTGCAAGGACCGCCGTCGTCTAATCAAAGACGCCGTCTTCGCGCGCCACCACCTCGCGGCGGCGCACTCCGACTACTGCCACTGCCTCCGCCTCACCGGCTCCGCACTCTACACTTTCGCCGCCGGCGAGCCCCTCGCCGTCGCCGACGAGAcccccgccgtcctcctccgcacaccaccgccacatcctcatcctcatcctcaacctcctcctcctTCCGCCGACGTCACAAGCCCCAAACTCCCTCGCATCGTAACCTCCGCCACCGCGAACCGCCGCAAACCGCCGCCGAAGCTCCCTCACATACTCTCCGATTCAAGCCTTTGCTCCTCGCCGCGAAGCCAATACTCGAATTTCTTTGGAACCGCACAACAAccaccgcatcctcttcctctcgccgccacgcgccaccgcaagccgccgccgAAGCTCCCTCACATACTCTCCGAATCGAGCCTCTGCTCCTCGCCGCGGAGCGAGTACTCGAATTTCTTCGCCACCGCGCAACAAGCTCAAGCCACGCCTACTTCGCAAGCCTCTTCGGTTTGGAATTGGGAGAATTTCCATCCTCCTCCGTCTCCTCCAGGCTCCGATTACTTCCGTCAAcaaaaacaaaatcacaaatcgaaaacacctaatttcgaaacatcagaatccgaatccgaatcTACCTACAACATGTTCCACTCGAGGCCTCAACGTAATCTCAAAACCGAAAACGCAAACGTTGATTCGCAACAAAGAGAAGAGGTTACGGAATCGGAATACGAATACTTACATGAACCGGTTCAGCCGGAGCGCGAGGAGGTTGAGTGCAGCGAGTGGGAGGACCGTTACACTTCCTCGAGTTCGTCGGAGCCGGAGGAAGGAGTGACCGGATTTGGTTCAgcggcgagggcggagagtgtcgccggcggcggtgctccggcggcgAAGGATGAAAAAAAAGGTGATGATGCGACGGAGGCGAATGTGGCGGTGAGGCATAGGGATTTGAAGGAGATTGTTGAAGCGGTTAGGGATAACTTTGAGAAAGCTGCGGTTGCCGGAGACCAGTTATCGGAGATGCTCGAGGTTAACAGAGCGCACCTTGATCGGAGTTTCAAGCAATTGAGGAAAACACTTTACCACTCAAATAGTATACTGAGCAACCTCAGCTCGAGTTGGACTTCTAAACCGCCGTTGGTGGTTAAGTACCGGTTCGATGCCGGTTCGTTGAATGGACCGGGCGGTTCGAAGAGTCTCTGCTCCACTTTGGAACGGCTCTTAGCTTGGGAGAAGAAGCTGTATCAAGAAGTGAAGGCTAGAGAAGGTGTGAAGATTGAGCATGAAAAGAAATTATCAGCCCTGCAGAGTCAAGAGTGCAAGGGGGGTGATGAAGCAAAGCTAGATAAAACCAAGGCTTCCATAACAAGGTTGCAGTCATTAATTGTTGTCACATCTCAGGCTGTGTCTACCACCTCACATGCCATTAATGGTCTTAGGGACACTGAACTTGTTCCTCAGCTTGTTGAGCTCTGTCACAGAATCATGCACATGTGGAGGTCAATGCACCAGTACCATGAAATTCAAAGCAACATTGTGCAGCAAGTTCGTGGCCTTGTGAACCAATCATGCAAGGGTCACTCAACATCTGAATTGCACAAGCAGGCAACTCGGGATCTTGAGTCAGCTGTGTCAGCATGGCACTCCAGTTTCTGCCGCCTCATAAAATTCCAACGTGACTTCATCCTGTCTCTACATGGATGGCTCAAGTTGAACCTTATTCCAGTcaacaatgaaaacaacaacaacaaAAGTGAACCATCTGATGTGTTCTCTTTCTGTGATGAATGGAAACTTGCTCTTGACCGTGTTCCGGACACGGTTGCTTCTGAGGCAATCAAAAGCTTCATCAATGTTGTCCATGTGATATCCGTGAAGCAATCTGAAGAGCTCAAGATTAAGAAGAGAACCGAGACTGCTTCCAAGGAACTTGAGAAAAGAACTTCATCTATAAGAAGCATAGAAAGGAAGTTCTATAACTCATATTCTATGGTAGATATTACTCCTCCTCATCATGAGTCTTATAATAATGGACAAGGCTTGGATGCAAGAGACCCTCTTGCTGAGAAAAAAGTGGAACTAGCAGCTTGCCAAAGGCGCGTTGAAGATGAAATGGTGAGGCATTCAAAGGCTGTTGAGGTGACTAGAGCCATGACACTCAACAATCTACAGACAGGCTTGCCTGGAGTGTTCCATGCTTTGACCAGTTTTTCTTCATTGTTCACCGAGGCTCTTGAGTCGGTATGTAGCCATTCATGTGCCGTCAAGTAG 2364 0.4492 MGCTASKLDNEETVKRCKDRRRLIKDAVFARHHLAAAHSDYCHCLRLTGSALYTFAAGEPLAVADETPAVLLRTPPPHPHPHPQPPPPSADVTSPKLPRIVTSATANRRKPPPKLPHILSDSSLCSSPRSQYSNFFGTAQQPPHPLPLAATRHRKPPPKLPHILSESSLCSSPRSEYSNFFATAQQAQATPTSQASSVWNWENFHPPPSPPGSDYFRQQKQNHKSKTPNFETSESESESTYNMFHSRPQRNLKTENANVDSQQREEVTESEYEYLHEPVQPEREEVECSEWEDRYTSSSSSEPEEGVTGFGSAARAESVAGGGAPAAKDEKKGDDATEANVAVRHRDLKEIVEAVRDNFEKAAVAGDQLSEMLEVNRAHLDRSFKQLRKTLYHSNSILSNLSSSWTSKPPLVVKYRFDAGSLNGPGGSKSLCSTLERLLAWEKKLYQEVKAREGVKIEHEKKLSALQSQECKGGDEAKLDKTKASITRLQSLIVVTSQAVSTTSHAINGLRDTELVPQLVELCHRIMHMWRSMHQYHEIQSNIVQQVRGLVNQSCKGHSTSELHKQATRDLESAVSAWHSSFCRLIKFQRDFILSLHGWLKLNLIPVNNENNNNKSEPSDVFSFCDEWKLALDRVPDTVASEAIKSFINVVHVISVKQSEELKIKKRTETASKELEKRTSSIRSIERKFYNSYSMVDITPPHHESYNNGQGLDARDPLAEKKVELAACQRRVEDEMVRHSKAVEVTRAMTLNNLQTGLPGVFHALTSFSSLFTEALESVCSHSCAVK 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01583 787 MobiDBLite consensus disorder prediction 206 272 - -
Cca01g01583 787 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Cca01g01583 787 MobiDBLite consensus disorder prediction 72 93 - -
Cca01g01583 787 MobiDBLite consensus disorder prediction 71 126 - -
Cca01g01583 787 Pfam Protein of unknown function (DUF632) 348 652 IPR006867 -
Cca01g01583 787 MobiDBLite consensus disorder prediction 293 341 - -
Cca01g01583 787 MobiDBLite consensus disorder prediction 327 341 - -
Cca01g01583 787 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 1 787 - -
Cca01g01583 787 PANTHER UNCHARACTERIZED 1 787 - -
Cca01g01583 787 MobiDBLite consensus disorder prediction 214 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01583 Cca-Chr1 35544611 35551583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01583 1 82 Acyl Lipid Metabolism Gene Families AT2G27090 30.303 4.47e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01583 - - gmx:100792843 1181.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01583 01 35544611 35551583 Cca01g01583 01 35544611 35551583 ECH
Cca01g01583 01 35544611 35551583 Cca07g02085 07 48624841 48630414 PCT