Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02081 ATGCATtcatcatcatcatcgtcgtcatcatTTTCCCGCCAAAAAGAAGAGAAACTTGGAAAGAGGTGGAAGGAGTACCAAGGCATGAGAAATTGGGACGGTTTGCTCGACCCATTAGACGACAACCTACGAGGTGAAATCCTAAGGTACGGTCATTTCGTGGAAGCTACGTACAAATCCTTCGAATTTGACCCTTCCTCTCCCAATTACGCAAACTGCAGATTCCCCAAAAGCACTTTTTTAGAACGATGTGGTTTACCAAACACGGGCTACAAGGTAACAAAATACCTACGTGCCACCTCGGGGATTCAGCTACCTAGTTGGGTTGACAAAGCACCAAGCTGGGTAGCAACACCATCAAGCTACGTGGGATACGTAGCGGTGTGTGACAACAAAGAAGTCATCAAAAGGCTTGGTCGGCGCGACATAGTTGTGGCATATAGAGGAACAACAACATGTTTGGAATGGTTGGAGAATTTTCGTGCCACACTCACCAACCTCCCAATCTCATGCACCACCCAAAGACCCTTTGAAAAAAATAATCACAATATCATGGACGGTAGTGGGGCCATGGTAGAAAGCGGATTCTTGAGTCTCTACACCTCATCACTTCTTGCAAAACTGAGTCTGCAGGAAATGGTGAAAGAAGAGATCTCAAGAATCCTCCACACTTATAGTAGGGACTCAACACCGCTGAGTCTGACCGTCACCGGCCACAGTCTGGGAGCGGCATTGGCAATGCTAACAGCCTACGATGTCAAAACTGCCTCTCCCAAACTGCCGGTGACGGTCATCTCCTTCGGTGGTCCCCGTGTCGGGGACCGGAGATTCCGGAGGCAGCTTGAAAGGCAAGGGACGAAGGTTCTGCGCATAGTGAACTCCGACGACGTGATCACCAAGGTTCCGGGGTTTGTGTTCGACGACGACGTGGCGCGCGGTGGTGGGGTCCACGTGGCGGGGCTTCCGAGCTGGATACAGAAGAGGGTGGAGGAGGCGCAGTGGGTGTACTCGGAGGTTGGGAGGGAGCTACGGTTGTGTAGCAGGGATTCTCCGTACCTAGGAAACACGAATGTCGCCACGTGTCACGAGCTGAACACGTATATGCATCTTGTCGATGGATTTGTCAGCTCCACGTGTCCCTTCAGAGCCTCCGCGAAGAGGTTCCTCCGGCGATGA 1176 0.506 MHSSSSSSSSFSRQKEEKLGKRWKEYQGMRNWDGLLDPLDDNLRGEILRYGHFVEATYKSFEFDPSSPNYANCRFPKSTFLERCGLPNTGYKVTKYLRATSGIQLPSWVDKAPSWVATPSSYVGYVAVCDNKEVIKRLGRRDIVVAYRGTTTCLEWLENFRATLTNLPISCTTQRPFEKNNHNIMDGSGAMVESGFLSLYTSSLLAKLSLQEMVKEEISRILHTYSRDSTPLSLTVTGHSLGAALAMLTAYDVKTASPKLPVTVISFGGPRVGDRRFRRQLERQGTKVLRIVNSDDVITKVPGFVFDDDVARGGGVHVAGLPSWIQKRVEEAQWVYSEVGRELRLCSRDSPYLGNTNVATCHELNTYMHLVDGFVSSTCPFRASAKRFLRR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02081 391 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 6 390 - -
Cca07g02081 391 Pfam Lipase (class 3) 144 304 IPR002921 GO:0006629
Cca07g02081 391 CDD Lipase_3 92 309 - -
Cca07g02081 391 Gene3D alpha/beta hydrolase 22 390 IPR029058 -
Cca07g02081 391 SUPERFAMILY alpha/beta-Hydrolases 46 305 IPR029058 -
Cca07g02081 391 PANTHER PHOSPHOLIPASE A(1) DAD1, CHLOROPLASTIC 6 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02081 Cca-Chr7 48527747 48528922 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02081 18 391 Acyl Lipid Metabolism Gene Families AT2G44810 66.133 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02081 K16818 - gmx:100800549 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02081 07 48527747 48528922 Cca07g02081 07 48527747 48528922 ECH
Cca01g01578 01 35302684 35303277 Cca07g02081 07 48527747 48528922 PCT