Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01959 ATGTGGGGCACAATCGCCAACTTGAAGGAGAACTTGAACAAGATTGCTCTCGACGTTCACTACGCcgacgacgacgacgacgacgacgacgCCGTTTTCACCGCCGCCGTCTCCGATCGACGCAATTCTCACAGCTTTGCGCATTCCAAGTCGCTTCCTAGGTCGCCCCCGCCCAACGGAACATCAGATCACCCCTACGCTTCGGAGATAGAACAATATAAAGCTGAAATCAAGAGACTTCAAGCATCTGAGGCAGAAATTAAAGCACTATCTGTTAATTATGCAGCTTTATTAAAAGAGAAAGAGGATCATATTGTTAGATTGAATAAAGAAAATGGCTCATTAAAACAGAATTTGGAGGCTACAAGTCCAGCATCTGCAAATGGCGCTTACACAGTCAAGGGAAGTAGTGACCAATCATCAAATCGACAGCATAGGTTCACAACTCAAACGAAAAATCGTTATGCTACAAACAATGGAACCTCATTGGCTTTGGAATCTGATGCTATTCAAAGTAAGATGGTATCTAAACATTCAAACTTACAAGTAAAGGACAAGGAGCTAGCAGATATGGTAGAAGGAAAAAGTAGCCCCACAGCAGCAGCACAACATACTCATGAGATACGAAAAATGAACTTGGAACTAGAGCAAGAACGCAAAAAATTGGCAAATATTCAGCTAAAATTTCAGGAGGAAGAGAAATTGAACAAGTCTTTCCAGGAGGAGCTTAAATTGTTAAAGTTGGAAAGAGACAAAACAACAAATGAGGTGAGCAAATTACATGATGAATTAAATGAGAAAATATCAGAAATACGACGTCTGCAATTGGAGTTGACTAGACGGGAAGGTGAAGAAGCAGGTGGTTCTGTGGATAGCCTCCAAAAGCAAATTGAAATTTTAGAGAAGGAAAACACTACTCTTAAGTTGGAAAAGGATGAACTTGAGGCTGCACTCAAATTAAGTAGGGTGTCTGGTATAATGTCACCTGATCCTTCTCAGATTCAGAACAAGGTTCCAAACAGTAACCGTGATTTATCAGATCCTCCCAAAGGATTTCCAGGGAAAGAAGACTTGGAAAGATCCTTACATAAGCTAAGTAAAGAATTGAAAGAAACACAAAAGGAGAAGGACAAAGCAATACAACAATTGACCCGTCTTAAACAGCATTTGTTAGAAAAGGAATCTGAAGAGTCTGAAAAAATGGACGAGGATAGCAAAATCATTGAAGAACTACGTGACAGCAATAATTATTTACGGGCTCAAATATCACATCTGGAGAGAAATCTGAAACAGGCAACTGCAAGTCAGGAGAAACAGAGGATGGAAAATGACAATGAAATTCTTAAGTTTAGGGAAATAGTTGATGACCTGAACAAGAAACTTACAAACTGTATGAGCACAATAAATGCTAAGAATACTGAACTGTTAAATCTACAGACAGCTCTTGGACAATATTATGCTGAAATTGAAGCTAAGGAACATTTAGAAGGAGATTTGGCTCGTGCAAAGGAAGAAACATCTAAGCTTTCTCAACTGTTGAAAGATGCAAATTTCCGAGTAGATGCATTGATCAGTGAAAAAGAGGAAATTTTAGCCAAGCTTTCTCAATCTGAGAAGGTACAATCAGAATGTAGAAGTAGAGTAAGCAAGCTCGAAGAAGACAATTCAAGACTGAGGCGAGCTCTTGAACAGAGTATGACACGGCTAAATAGAATGTCAGTGGATTCTGATTTTCTTGTTGACAGGCGCATTGTGATAAAATTACTTGTAACTTATTTCCAGAGGAACCACAGCAAAGAGGTTTTGGATCTAATGGTTCGCATGCTGGGGTTCTCTAATGAGGACAAACAAAGAATAGGTGTTGCTCAACAAGGTCCAGGAAAAGGTGTTGTTCGTGGTGTTCTTGGGTTGCCTGGCCGCCTAGTTGGAGGCATCTTGGGAGGAAGTGGTTCAACTGAATCAGCTGTAAATATGGGAGCAGATAACCAGTCCTTTGCAGATCTGTGGGTTGATTTTCTTCTCAAGGAAACCGAAGAAAGAGAGAAGAGGGAGTCAGGAGGAACTACAGATATATCTATGGACGATTCACATGATAGAAGTTTCAATACTAGTTCTTCTCCACAACAATCCAATCGGAGGTTTAGCACTGGAACAACATCAATCATCTCACCCACTAATCAAAACATCACTTCTACCCCTAGTGGATATTTTCAGCATTCCGAACATATTGGTTCCGAGTTCTCAACAGTTCCCCTTACATCATCAGATAGTAAAACTCCTAGTTCAAAACTTCCTAGATACTAA 2304 0.395 MWGTIANLKENLNKIALDVHYADDDDDDDDAVFTAAVSDRRNSHSFAHSKSLPRSPPPNGTSDHPYASEIEQYKAEIKRLQASEAEIKALSVNYAALLKEKEDHIVRLNKENGSLKQNLEATSPASANGAYTVKGSSDQSSNRQHRFTTQTKNRYATNNGTSLALESDAIQSKMVSKHSNLQVKDKELADMVEGKSSPTAAAQHTHEIRKMNLELEQERKKLANIQLKFQEEEKLNKSFQEELKLLKLERDKTTNEVSKLHDELNEKISEIRRLQLELTRREGEEAGGSVDSLQKQIEILEKENTTLKLEKDELEAALKLSRVSGIMSPDPSQIQNKVPNSNRDLSDPPKGFPGKEDLERSLHKLSKELKETQKEKDKAIQQLTRLKQHLLEKESEESEKMDEDSKIIEELRDSNNYLRAQISHLERNLKQATASQEKQRMENDNEILKFREIVDDLNKKLTNCMSTINAKNTELLNLQTALGQYYAEIEAKEHLEGDLARAKEETSKLSQLLKDANFRVDALISEKEEILAKLSQSEKVQSECRSRVSKLEEDNSRLRRALEQSMTRLNRMSVDSDFLVDRRIVIKLLVTYFQRNHSKEVLDLMVRMLGFSNEDKQRIGVAQQGPGKGVVRGVLGLPGRLVGGILGGSGSTESAVNMGADNQSFADLWVDFLLKETEEREKRESGGTTDISMDDSHDRSFNTSSSPQQSNRRFSTGTTSIISPTNQNITSTPSGYFQHSEHIGSEFSTVPLTSSDSKTPSSKLPRY 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01959 767 MobiDBLite consensus disorder prediction 43 66 - -
Cca07g01959 767 Coils Coil 70 118 - -
Cca07g01959 767 Coils Coil 548 568 - -
Cca07g01959 767 Coils Coil 492 512 - -
Cca07g01959 767 PANTHER VESICLE TETHERING-LIKE PROTEIN, PUTATIVE-RELATED 1 767 - -
Cca07g01959 767 Coils Coil 290 320 - -
Cca07g01959 767 MobiDBLite consensus disorder prediction 698 767 - -
Cca07g01959 767 MobiDBLite consensus disorder prediction 679 697 - -
Cca07g01959 767 Coils Coil 408 442 - -
Cca07g01959 767 MobiDBLite consensus disorder prediction 326 357 - -
Cca07g01959 767 Coils Coil 201 284 - -
Cca07g01959 767 MobiDBLite consensus disorder prediction 117 152 - -
Cca07g01959 767 Coils Coil 355 396 - -
Cca07g01959 767 MobiDBLite consensus disorder prediction 326 343 - -
Cca07g01959 767 PANTHER MYOSIN HEAVY CHAIN - RELATED 1 767 - -
Cca07g01959 767 MobiDBLite consensus disorder prediction 679 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01959 Cca-Chr7 47068234 47077241 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01959 - - gmx:100794376 1145.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01959 07 47068234 47077241 Cca07g01959 07 47068234 47077241 ECH
Cca01g02348 01 52061225 52084856 Cca07g01959 07 47068234 47077241 PCT