Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01951 ATGAAGAAGTTTGTACTCAAGTTGGATTTGCCAGATGACAAGGCCAAGCAGAAGGCCCTGAAAACAGTTTCAACACTTTCAGGGATTGATGCCATCTCAATGGACATGAAGGAGAAGAAGCTAACAGTGATAGGAACTGTTGATCCTGTGAATGTGGTGAGCAAGCTTCGCAAGTACTGGCAGACAGACATAGTCTCAGTAGGGCCAGCAAAGGAGCCAGAGAAGAAAGAGGAGCCAAAGAAAGAAGAGGGCAAGAAGGAGGAAGAGAAGAAGGAGTCTTCAAAAAAGGAGGAAGGGAAAAAAGAAGAGGAGAAAAAGGAAGAGCCAAAGAAAGAAGAAGAGAAGAAGGAAGAAGAGAAGAAAGAAGAAGAGAAGAAAGATGATGAGAAGAAGAAAGAGGCTGCACCAGCCCCACCACCAGATCCAGTTCTAGAGCTGGTCAAGGCTTATAGGGCCTATAATCCCCACATGACCACATACTACTATGTTCAAAGCATGGAAGAGAATCCCAATGCTTGTGTCATTTGTTAA 531 0.4426 MKKFVLKLDLPDDKAKQKALKTVSTLSGIDAISMDMKEKKLTVIGTVDPVNVVSKLRKYWQTDIVSVGPAKEPEKKEEPKKEEGKKEEEKKESSKKEEGKKEEEKKEEPKKEEEKKEEEKKEEEKKDDEKKKEAAPAPPPDPVLELVKAYRAYNPHMTTYYYVQSMEENPNACVIC 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01951 176 Pfam Heavy-metal-associated domain 15 58 IPR006121 GO:0046872
Cca07g01951 176 Coils Coil 86 135 - -
Cca07g01951 176 Gene3D - 1 72 - -
Cca07g01951 176 MobiDBLite consensus disorder prediction 69 136 - -
Cca07g01951 176 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 176 - -
Cca07g01951 176 MobiDBLite consensus disorder prediction 65 144 - -
Cca07g01951 176 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01951 Cca-Chr7 46919501 46922818 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01951 - - gmx:100527231 137.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01951 07 46919501 46922818 Cca07g01951 07 46919501 46922818 ECH
Cca07g01951 07 46919501 46922818 Cca01g02325 01 51765161 51767956 PCT