Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01937 ATGTCCACCATGAACAACAAGAACCTCAAAGATTCCGAGCACTTGCACTTTTCATGGACCATAACAAAACTATTGTCTTCCTTCTTCCTCTTAGTCTCCCTCTTCTACCTCTTCTACTCCCTTGGCTTCCTCACACACTCTTACAATTGTGCACAAAAGAAGCCTTACCCTTATTACCCTCTTCCCACCATCAACCACAACGTTAACACCACTCCTCCCCAAGTGCCCTTTGAAAAAACCAACATCTCCCACATAGTATTCGGCATAGGGGCCTCGTCCAGGCTCTGGGCCCACCGAAAAGAGTTCATCAAGCTCTGGTGGAGGCCCAACGAGACAAGGGGCAACGTGTGGCTAGACCAACCAGTGGAAAAAACCGAACCCAGCGAAGACCACCTAGTTCCAACGTTGAAGATATCGAGCGATGTCTCGAACTTCAAGAGCAAGAATCCACGTGGCAACAGGTTGGGGATTCGAATATCCCGCATAGTGTCGGAGACAGTGAGGCTTGGGATGGAGAATGTGAGGTGGTTTGTGATGGGGGATGATGACACTTTCTTTGTGACGGAGAATTTGGTGAAGGTGTTGCAGAAATATGACCATAATGAGTTTTACTACATTGGGACATCTTCGGAGAGCCACATGCAGAATATTCATTTTTCTTATAATATGGCATTTGGGGGAGGGGGGTTTGCGATAAGTTACCCTTTGGCTGTGGCGTTGGAGAGGATGCAGGATAGGTGCATAGAGAGGTACCCTGCATTGTTTACCTCAGATGATATGATCCAGGCTTGTATGGCTGAGCTTGGGGTTCCTCTCACCAAAGAAATTGGCTTCCATCAGtttgatGTGCACGGCAACGTGTTCGGGCTGCTAGCAGCTCACCCCATCACACCGCTAGTTTCGATGCACCACTTGGACCTGGTGGAGCCCATATTCCCGAACGTGGAGCGCGTGGAGGCCCTACAGCGGCTGATTGGGCCGATGAAAGTGGACCCGTATGGGCTGATGCAACAGTCGATTTGCTACGACAAGGCCCGGCACTGGACCATATCGGTGTCTTGGGGTTACGCAGTTCAAATATTCCGGGGCGTGTTCGTGGCCCGGGACATGGAGATGCCCGCCAGAACCTTTCTCAATTGGGACCGCCGTGCAGATTATACGGGCTTTCCCTTCAACACGCGCCCATTCAGCCGCAATGTTTGTCAGAAGCCTTTTGTTTTTTACTTGTCCGCTTATGATGGGCTTGTTAATCACACTCTCACCGAGTATATTCGGGTCCAGCCCAACCCCGACTGCAAGTGGAAAATGCCGGATCCAGCCCAAATCCAGATTGTGAAGGTCATCAAGAAACCCGACCCGCATTTATGGGATAAGTCTCCAAGAAGAAATTGTTGCAGGGTTCAACCAACAAATGAAGAAGGAACTCTGGTGATTGACGTGGGAGAATGCAGAAAAGATGAAATTGTTGAGTAA 1473 0.4956 MSTMNNKNLKDSEHLHFSWTITKLLSSFFLLVSLFYLFYSLGFLTHSYNCAQKKPYPYYPLPTINHNVNTTPPQVPFEKTNISHIVFGIGASSRLWAHRKEFIKLWWRPNETRGNVWLDQPVEKTEPSEDHLVPTLKISSDVSNFKSKNPRGNRLGIRISRIVSETVRLGMENVRWFVMGDDDTFFVTENLVKVLQKYDHNEFYYIGTSSESHMQNIHFSYNMAFGGGGFAISYPLAVALERMQDRCIERYPALFTSDDMIQACMAELGVPLTKEIGFHQFDVHGNVFGLLAAHPITPLVSMHHLDLVEPIFPNVERVEALQRLIGPMKVDPYGLMQQSICYDKARHWTISVSWGYAVQIFRGVFVARDMEMPARTFLNWDRRADYTGFPFNTRPFSRNVCQKPFVFYLSAYDGLVNHTLTEYIRVQPNPDCKWKMPDPAQIQIVKVIKKPDPHLWDKSPRRNCCRVQPTNEEGTLVIDVGECRKDEIVE 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01937 490 Pfam Protein of unknown function, DUF604 215 465 IPR006740 -
Cca07g01937 490 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 1 489 - -
Cca07g01937 490 PANTHER FRINGE-RELATED 1 489 - -
Cca07g01937 490 Gene3D - 72 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01937 Cca-Chr7 46708602 46712587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01937 21 485 Glycosyltransferase AT5G41460 56.911 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01937 - - gmx:100777888 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01937 07 46708602 46712587 Cca01g02302 01 51483669 51487601 PCT